| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0455 |
|---|
| Symbol | |
|---|
| ID | 4597354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 484783 |
|---|
| End bp | 485739 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639775069 |
|---|
| Product | substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_921684 |
|---|
| Protein GI | 119714719 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACATGC AGGTACGACG CTCGTTGGCC GCGGCGCTCG CCGTCGGCTC CCTCTTCCTC
GCCACGGCCT GTGCCGACGA CGACCTCGAC TCCAAGCAGG CCGACGACGC CACACCGTCG
GCGACCACCG ACCAGGGCCC GGTCCGGATC GCGGGTCAGA GCTTCACCGA GGCGGCCATC
GTCGCCGCGA TGTACGACGA GCTCCTCACC GCCGCCGGCT ACGACACCGA CGTGAAGCTG
GTCGACACCC GCGACGCCTA CATGGCCACG TTCCCGGACA GTGTCGACGT CGTGCCCGAG
TACGTCGGCG GCATCGTCAA CTTCCTCAAC GCCCGGGAGA ACGGCGCGAA GGCCGAGCCC
TTCACGGCCG GCGACGGGGC CGAGCTCGTC GACCAGGGCA AGTCGCTGCT CGATGCGGCG
GGCATCGCGC TCCTCGACCA GTCCGCGGCG ACCGACACCA ACGCGTTCTT CGTGACCAAG
GACTTCTCCG AGTCCGAGGG CGTGACCAAG CTCTCCGACC TCGAGGGCAG GTCGGTCAAG
CTGGCCGCGG CTCCCGACTG CGAGGGCCGG CTCGACTGCG AGGGCGGCCT GGTCGACCAG
TACGGCATCG ACGTCACCGA GGTGCTCCCG CTGGGCTACG CCAGCAACGA CACCTACCAG
TCGGTGATCA GCGGCGAGTC CGAGCTCGGC GAGACCAGCA CGACCGACGG CACCCTGGAG
TCGCAGGGCC TGGTGGTGCT CGAGGACGAC AAGCAGATCC AGCCCGCCCA GAACCTCGTC
CCCGCGGTGT CGAGCGCCTT CTTGGAGCAG CACCCGGACA TCGCGGACGT CCTCAACGGG
TTGATGGCCG CCCTCACCAC GGAGAAGCTC ACCGAGCTGA ACGGCGCCGT GGCCGTCGAC
CGCGACAAGC CCGAGGACGT CGCCCACCAG TTCCTGGTGG ACGAGGGGCT CATCTAG
|
|---|
| Protein sequence | MHMQVRRSLA AALAVGSLFL ATACADDDLD SKQADDATPS ATTDQGPVRI AGQSFTEAAI
VAAMYDELLT AAGYDTDVKL VDTRDAYMAT FPDSVDVVPE YVGGIVNFLN ARENGAKAEP
FTAGDGAELV DQGKSLLDAA GIALLDQSAA TDTNAFFVTK DFSESEGVTK LSDLEGRSVK
LAAAPDCEGR LDCEGGLVDQ YGIDVTEVLP LGYASNDTYQ SVISGESELG ETSTTDGTLE
SQGLVVLEDD KQIQPAQNLV PAVSSAFLEQ HPDIADVLNG LMAALTTEKL TELNGAVAVD
RDKPEDVAHQ FLVDEGLI
|
|---|
| |