Gene Noca_0442 details

Gene Information

• Locus tag: Noca_0442
• ID: 4597341
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 473580
• End bp: 474293
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639775056
• Product: hypothetical protein
• Protein accession: YP_921671
• Protein GI: 119714706
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.540982
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCACC GCCGTACCTT CGCCGCCGCC GTCGCGCTGC TGGCCGCCGC GGTCATCGCG 
CCCCAGGCGC TGCCCGCCTC CGCGTCGCCC GCCGGCCGGG CCGTGACCGC CCAGCGGGCC 
GGCCAGGCGC TCATCCAGGG CGTTGTCGTC GACCAGGCCG GCCGCTACGT CGACGACGTC 
GAGGTCCAGG CGACCAAGGC CGACGGCACC CCTGCGGCCT CCGCGATCAC CTACGCCAGC 
GACCGCGAAG ACGGCCCCCA GCACGGCTAC TTCTTCCTCG AGGTCACCCG TGGGACCTAC 
ACCCTGACGT TCTCGCGCGA TGGGTACCGG ACGCTCGTTC TCGACGACCT CCAGATCGAG 
AGGGCTCGTC AGAAGCTGAG CCTGGGTGAG GTCGAGATCC AGAAGAAGCT GGCGGAGAGC 
AAGACCGAGG CCAGCCTCGT GCGGCGCACG ATCACGACCA AGCAGAACGG CGAGGTCGTG 
GTGACCGTGT CCGCGAGGGG CGTCAAGCCC ACGGGCGACG TCGAGATCCG CGAGGGCCGC 
ACCGTGGTCG GCGAGGACGG CCTCAGGGCC AGGGACAACG GCCAGGTCAC GATCGAGCTG 
GACCGGTTGC CCCGCGGGAC CCACGAGCTC AAGGCCTACT ACCTCGGCTC CCCGGACCTG 
AAGGTGTCGG CGTCCACGTC CTTCACCCTG ACCGTCACCA GGGGGCGGCA CTGA 

 

Protein sequence

MSHRRTFAAA VALLAAAVIA PQALPASASP AGRAVTAQRA GQALIQGVVV DQAGRYVDDV 
EVQATKADGT PAASAITYAS DREDGPQHGY FFLEVTRGTY TLTFSRDGYR TLVLDDLQIE 
RARQKLSLGE VEIQKKLAES KTEASLVRRT ITTKQNGEVV VTVSARGVKP TGDVEIREGR 
TVVGEDGLRA RDNGQVTIEL DRLPRGTHEL KAYYLGSPDL KVSASTSFTL TVTRGRH