| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0440 |
|---|
| Symbol | |
|---|
| ID | 4597339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 471452 |
|---|
| End bp | 472498 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639775054 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_921669 |
|---|
| Protein GI | 119714704 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5282] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03624] putative hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0835114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGC ACTCCGGCCC CGAGCTGGTC GACTGGGACC TCGCGGTCGC CCTCGGCTCC
CGGATCGCGG GCGACGGCCC GGTCGTGGAC CGCCGTACCG CGGACGCCGT GGTCGCCGAG
CTGCGCGCCG ACGCCGATCG GTCGACGGGC CTGGTCCGTG CGCACACCGG GCTGCTCGCC
GCCGAGCGGA CCGCCCCGGT CCTGGTCGTC GACCGGCCCG GCTGGGTCAT CGCCAACGCC
GACGGGTTCG CGACGATCCT GGCCCCCGTC GTCGACAAGC TGTCCTCGCG CAAGGGCGAG
CCGACCGGGC TGACGAAGGC GATCGGCTCG CGCGTCACCG GGGCCGAGGT CGGCGCGCTG
CTGGGCTTCC TGGCCGGGAA GGTGCTCGGC CAGTTCGACC CGTTCCACGC CCCGTCCGGG
CGGCTGCTGC TCGTCGCGCC GAACATCGTC CACGTCGAGC GCGAGCTCGG CGTCGTCCCC
CGGGACTTCC GGCTCTGGGT GTGCCTGCAC GAGGAGACCC ACCGGGTGCA GTTCACCGCC
ACCCCGTGGC TGGCCGACCA CCTGCTGGGA GAGATGCACG CGCTCGCCGA GAGCCTCGAG
CCGAGCGGCC TGCTCGACGA CGGGTTGACC CGGATCGCCG GGGCCGTCCG GAGCGCTCGC
GAGGGTGGCG GCAGCCTCCT GGACCTGATC GGAACCCCGG AGCAGAAGGA GATCGTCGAC
CGGGTCACCG GCGTCATGTC CCTGCTCGAG GGCCACGCCG ACGTGGTCAT GGACGACGTC
GGCCCGGGCG TGATCCCGAC GGTGGCCGAC ATCCGCAAGC GGTTCAACCG CCGCCGCCAG
GGCGTCGGGG TACTCGACCG GCTGCTGCGC CGGGTGCTCG GCCTGGACGC CAAGATGGCG
CAGTACCGCG ACGGCGCGAA GTTCGTCCGT GCGGTCGTCG ACAAGGCCGG CATGACCGAG
TTCAACGCGG TCTGGGAGCG GCCCGAGAAC CTGCCGTCGA AGGCCGAGAT CGCGGACCCA
CGAGCCTGGA TCAGCCGGGT GCTGTGA
|
|---|
| Protein sequence | MSKHSGPELV DWDLAVALGS RIAGDGPVVD RRTADAVVAE LRADADRSTG LVRAHTGLLA
AERTAPVLVV DRPGWVIANA DGFATILAPV VDKLSSRKGE PTGLTKAIGS RVTGAEVGAL
LGFLAGKVLG QFDPFHAPSG RLLLVAPNIV HVERELGVVP RDFRLWVCLH EETHRVQFTA
TPWLADHLLG EMHALAESLE PSGLLDDGLT RIAGAVRSAR EGGGSLLDLI GTPEQKEIVD
RVTGVMSLLE GHADVVMDDV GPGVIPTVAD IRKRFNRRRQ GVGVLDRLLR RVLGLDAKMA
QYRDGAKFVR AVVDKAGMTE FNAVWERPEN LPSKAEIADP RAWISRVL
|
|---|
| |