Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0432 |
Symbol | |
ID | 4597744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 461272 |
End bp | 462150 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639775046 |
Product | sigma-70 region 2 domain-containing protein |
Protein accession | YP_921661 |
Protein GI | 119714696 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.320521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCA CCGATTCCAC CGACGTCTTC GTCGACCACC GCAACCTGCT CTTCACGGTC GCCTACGAGA TGCTCGGCTC GGCCGCGGAC GCCGAGGACG TGCTGCAGGA GACCTGGCTG CGCTGGGTCG AGGTCGACCG CGAGGAGGTG CGCGAGGCGC GCGCCTACCT GGTGCGGATC GCCACCCGGC TCGCGCTGAA CCGGATGCGC ACGAACGCCC GGCGCCGGGA GTCGTACGTC GGACCGTGGC TCCCCGAGCC GCTGCTCACC ACCCCGGACG TGGCGGAGGA CGTCGAGCTC GCCGACAGCG TCTCCCTGGC GATGCTCACG CTGCTCGAGA CGCTCGGCCC GACCGAGCGC GCGGTGTTCG TGCTGCGCGA GGTCTTCGAC TTCGGCTACG ACGAGATCGC GGCCGCGGTC GACAAGACGC CGGCCGCCGT ACGCCAGATC GCGCACCGCG CCCGCGGACA CGTCGCCGAG CGGCGGCCGC GGGCCGAGGC CACCCGCTCC GAGCGGGAGC ACGTGATGGC GACGTTCCTC GCTGCGGTCG CGACCGGCGA CATCCAGAGC CTGATGGACG TGCTCGCCCC CGACGTCGTG CTGGTCACCG ACGGCGGAGG GGTCAAGAAG GCCGCGCTCC GCCCGATCCT GGGCCGTGAC AAGGTGGTCC GCTTCCTCGG TGCGGTCTCC GAGGGCCTCG ACGCCGTCGC CGACGTGGTC GTCGTCAACG GCGCTCCCGC GCTGCGGATC GTGCTGGACG GCGAGCTCGA CACGGTCGCC TCGATGGTCG TCGAGGACGG CCTGGTCACC GGCCTCTACG TCGTACGCAA CCCGGCCAAG CTGGCCCGGC TCGACGCCGT CGTCACTCTG ACCCGTTGA
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Protein sequence | MNATDSTDVF VDHRNLLFTV AYEMLGSAAD AEDVLQETWL RWVEVDREEV REARAYLVRI ATRLALNRMR TNARRRESYV GPWLPEPLLT TPDVAEDVEL ADSVSLAMLT LLETLGPTER AVFVLREVFD FGYDEIAAAV DKTPAAVRQI AHRARGHVAE RRPRAEATRS EREHVMATFL AAVATGDIQS LMDVLAPDVV LVTDGGGVKK AALRPILGRD KVVRFLGAVS EGLDAVADVV VVNGAPALRI VLDGELDTVA SMVVEDGLVT GLYVVRNPAK LARLDAVVTL TR
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