Gene Noca_0432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0432 
Symbol 
ID4597744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp461272 
End bp462150 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content72% 
IMG OID639775046 
Productsigma-70 region 2 domain-containing protein 
Protein accessionYP_921661 
Protein GI119714696 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.320521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCA CCGATTCCAC CGACGTCTTC GTCGACCACC GCAACCTGCT CTTCACGGTC 
GCCTACGAGA TGCTCGGCTC GGCCGCGGAC GCCGAGGACG TGCTGCAGGA GACCTGGCTG
CGCTGGGTCG AGGTCGACCG CGAGGAGGTG CGCGAGGCGC GCGCCTACCT GGTGCGGATC
GCCACCCGGC TCGCGCTGAA CCGGATGCGC ACGAACGCCC GGCGCCGGGA GTCGTACGTC
GGACCGTGGC TCCCCGAGCC GCTGCTCACC ACCCCGGACG TGGCGGAGGA CGTCGAGCTC
GCCGACAGCG TCTCCCTGGC GATGCTCACG CTGCTCGAGA CGCTCGGCCC GACCGAGCGC
GCGGTGTTCG TGCTGCGCGA GGTCTTCGAC TTCGGCTACG ACGAGATCGC GGCCGCGGTC
GACAAGACGC CGGCCGCCGT ACGCCAGATC GCGCACCGCG CCCGCGGACA CGTCGCCGAG
CGGCGGCCGC GGGCCGAGGC CACCCGCTCC GAGCGGGAGC ACGTGATGGC GACGTTCCTC
GCTGCGGTCG CGACCGGCGA CATCCAGAGC CTGATGGACG TGCTCGCCCC CGACGTCGTG
CTGGTCACCG ACGGCGGAGG GGTCAAGAAG GCCGCGCTCC GCCCGATCCT GGGCCGTGAC
AAGGTGGTCC GCTTCCTCGG TGCGGTCTCC GAGGGCCTCG ACGCCGTCGC CGACGTGGTC
GTCGTCAACG GCGCTCCCGC GCTGCGGATC GTGCTGGACG GCGAGCTCGA CACGGTCGCC
TCGATGGTCG TCGAGGACGG CCTGGTCACC GGCCTCTACG TCGTACGCAA CCCGGCCAAG
CTGGCCCGGC TCGACGCCGT CGTCACTCTG ACCCGTTGA
 
Protein sequence
MNATDSTDVF VDHRNLLFTV AYEMLGSAAD AEDVLQETWL RWVEVDREEV REARAYLVRI 
ATRLALNRMR TNARRRESYV GPWLPEPLLT TPDVAEDVEL ADSVSLAMLT LLETLGPTER
AVFVLREVFD FGYDEIAAAV DKTPAAVRQI AHRARGHVAE RRPRAEATRS EREHVMATFL
AAVATGDIQS LMDVLAPDVV LVTDGGGVKK AALRPILGRD KVVRFLGAVS EGLDAVADVV
VVNGAPALRI VLDGELDTVA SMVVEDGLVT GLYVVRNPAK LARLDAVVTL TR