Gene Noca_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0422 
Symbol 
ID4597734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp453119 
End bp454018 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content77% 
IMG OID639775036 
ProductHemK family modification methylase 
Protein accessionYP_921651 
Protein GI119714686 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGACGC TCGGCATGGC AGCATCATCG ACCATGGCCG GTCCCGCTCC CGACGACGCC 
CTCGTCGCGA CCTTGCGGGC CGCCGGGTGC GTGTTCGCCG AGGACGAGGC TGCGCTGCTC
GCCCGCGAGG CCGGGGACGA GGCCGCGCTG GCGGCGATGG TCGCGCGCCG GGTCGCCGGC
GAGCCGCTGG AGCAGGTGCT CGGGTTCGCG GAGTTCCTCG GGCTGCGCGT CGCGGTCGAG
CCCGGGGTGT TCGTGCCGCG GCTGCGCACC ACGCTGCTGG CCCGCCGGGC GATCCGGGCG
CTCGAGCCGG GCGACCTCGC CGTCGACCTG TGCTGCGGCA CCGGCGCCAT CGGCGTGGCA
CTGCTCGCGG CGGTCCCGGG CGCCGAGGTG CACGCAGCGG ACATCGACCC GGCCGCGGTG
CGCTGCGCCC GACGGAACCT GCCGCCCGAC CGGGTCCACG AGGGCGACCT GTACGACGCG
CTGCCGGGCG AGCTGCGCGG GCGGGTGGCG GTCGTGGTCG CAAACGCGCC GTACGTCCCG
ACCGGCGCCA TCGCGACGAT GCCGCCCGAG GCGCGCGACC ACGAGCACCG GGTGGCGCTC
GACGGCGGCG CGGACGGTCT CGAGGTCGCC CGGCGGGTGA TCGCCGGGGC GCGGCCGTGG
CTCGCCCCCG GTGGCCGGGT GCTCGTGGAG ACGAGCGCCG CCCAGCGCGA CCTGGCCGCC
GCCCACGTCG TCGCGGCGGG CCTCGACGTC ACCGTCGCGT CGGCCGCGGA CGTCGACGGC
AACGTCGTGA TCGGGCGGCT CCACCCCGAG CGACTCAGCC CCGAGCGACT CAGCCCCGAG
CAGCTCAGTC CTGGGCAGCT CAGTCCTGGG CAGCTCAGTC CTGGGCGGCC CAGGTGCTGA
 
Protein sequence
MLTLGMAASS TMAGPAPDDA LVATLRAAGC VFAEDEAALL AREAGDEAAL AAMVARRVAG 
EPLEQVLGFA EFLGLRVAVE PGVFVPRLRT TLLARRAIRA LEPGDLAVDL CCGTGAIGVA
LLAAVPGAEV HAADIDPAAV RCARRNLPPD RVHEGDLYDA LPGELRGRVA VVVANAPYVP
TGAIATMPPE ARDHEHRVAL DGGADGLEVA RRVIAGARPW LAPGGRVLVE TSAAQRDLAA
AHVVAAGLDV TVASAADVDG NVVIGRLHPE RLSPERLSPE QLSPGQLSPG QLSPGRPRC