Gene Noca_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0403 
Symbol 
ID4597715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp433600 
End bp434634 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content72% 
IMG OID639775018 
Producttranslation initiation factor 2B subunit I 
Protein accessionYP_921633 
Protein GI119714668 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCTGG CATTGCAATG GCAGGAGGAC GCGCAGACGA TCCGGCTGCT CGACCAGACC 
CTTCTGCCCG TCGAGGAGCG CTACCTGGAC GTCGACACCG TCGACGCCCT GGTCGCCGCG
ATCCAGAGCC TGGCGGTCCG GGGAGCGCCT GCGCTCGGGG CCGTGGGTGC GCTCGGTGTG
GTCGTCGCCA TGCGGCAGGC CGAGCGCGAG GGCTGGGATG ACGAGCGGCT GCAGGTCGAG
GTCGACCGGA TCCGACTGGC ACGTCCGACG GCCGTGAACC TCGCCTGGGG CGTGGACCAG
GTCCGCGCCG CGATGCCGTC GGGGCCGGAG ACGGTGCTGA AGATGGCCAA GGCCGTCGTG
GAGGAGGACG AGGCGGCCAA CCGGACCCTC TCCCGGCTCG GTGCCGACTG GATCCTGGGT
CGCACCGGCA GGGAACGCGT GCGCGTCGTC ACGCACTGCA ACACCGGCGC GCTGGCCACC
TCGGCCTGGG GGACCGCCTA CGGGATCATC CACGAGCTCC ACGACCGTGG CGCCTTGGAG
GTCGTGTACG TCGACGAGAC CCGCCCGCTG CTCCAAGGTG CCCGGCTGAC CAGCTGGGAG
CTGACGCGGG ACGAGATCCC GCATCTGCTC GAGGTGGACG GCGCGGCGTC GAGCACGATC
GTGCGCGGCC TCGTGGACGT CGCGATCATC GGCGCGGACC GGATCACCGC CAACGGCGAC
ACTGCGAACA AGGTCGGCTC GCTGGCCCTG GCCCTGGCCT GCCAACGAGC CGGGATCCCG
TTCGTGGTCG CGGCGCCGAG CTCCACTGTC GACCTGGCGA CGGCCCATGG CGACGACATC
GCGATCGAGG AGCGGGACGC CGCGGAGGTG CTCAGTCTCG GGGGCCACCC GACGGCGTTG
CCGTCGACCC GGGTCTACAA CCCCGCCTTC GACGTGACTC CGCACGACCT GATCAGCGCG
ATCGTGACGG ACCGGGGGGT GGTCGAGCCG GCCGCCCGTC CCGCCCCGAA CCTGCTCGCA
TCGGTGGCGA GCTGA
 
Protein sequence
MVLALQWQED AQTIRLLDQT LLPVEERYLD VDTVDALVAA IQSLAVRGAP ALGAVGALGV 
VVAMRQAERE GWDDERLQVE VDRIRLARPT AVNLAWGVDQ VRAAMPSGPE TVLKMAKAVV
EEDEAANRTL SRLGADWILG RTGRERVRVV THCNTGALAT SAWGTAYGII HELHDRGALE
VVYVDETRPL LQGARLTSWE LTRDEIPHLL EVDGAASSTI VRGLVDVAII GADRITANGD
TANKVGSLAL ALACQRAGIP FVVAAPSSTV DLATAHGDDI AIEERDAAEV LSLGGHPTAL
PSTRVYNPAF DVTPHDLISA IVTDRGVVEP AARPAPNLLA SVAS