Gene Noca_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0402 
Symbol 
ID4597714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp432727 
End bp433446 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID639775017 
ProductGntR family transcriptional regulator 
Protein accessionYP_921632 
Protein GI119714667 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGACCC GCAACACACT GGCGTCTCGC ATCGCCGAGG ACCTCCGCGG CGACCTGTCC 
GCGGGGACCT ACGGCCCTGG TTCGAGACTG CCTACCGAGG CCCAGCTCAG CGAGAACTTC 
GGCGTGTCAC GCCCGACCGT CCGCGCCGCG TTGCGCGAGC TCGAGGCGCT GGGGCTGGTG 
CAGACCCAGC ACGGCGTCGG GACGTTCGTG GTCGAGCAGC CGGCGGTCCG CGCCGGGCTG 
GAGGGAATGG ACTCGATCAC GGACTCGATC CGCGCCACCG GGAAGGTCCC GGGCATGGTG 
TACGCGACCC GGCTGCTGCG ACCGGTGCTT CCCGAAGAGG CCGCATTCAT GGGGGTATCG 
GGTGATACCG AGGTCCTCGA GCTGCGACGC AAGCTCCTGG CCGACGGCGA GGTGGTCGCG 
TACTCCTACG ACCTCCTCCC CGCAACGCTG CTCCCGGACG GATTCGACAT CCAGACGCTG 
GAGGGGTCCC TGTTCGCATT CCTGCGCGGT GTGCTCCGGA TCGAGCCCGA CCACGGGGTC 
GCGGAGGTGC ATGCGGTGCA CTCCGACCAC GTGGGGTGGG GCGATGAGGC GAAGGCCCAC 
GATCTCTTCG TGCTGCTGAA CCAGCTGCAC TACGCCGGTG ACGACCGGTT GATCCTCTAC 
TCGCGCACCT ACTTCATCGA GGGCCGCTAC TCCTTCACGA TCTTCCGCAA CCACCGCTGA
 
Protein sequence
MRTRNTLASR IAEDLRGDLS AGTYGPGSRL PTEAQLSENF GVSRPTVRAA LRELEALGLV 
QTQHGVGTFV VEQPAVRAGL EGMDSITDSI RATGKVPGMV YATRLLRPVL PEEAAFMGVS 
GDTEVLELRR KLLADGEVVA YSYDLLPATL LPDGFDIQTL EGSLFAFLRG VLRIEPDHGV 
AEVHAVHSDH VGWGDEAKAH DLFVLLNQLH YAGDDRLILY SRTYFIEGRY SFTIFRNHR