Gene Noca_0386 details

Gene Information

• Locus tag: Noca_0386
• ID: 4597772
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 417242
• End bp: 417910
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639775000
• Product: thymidylate kinase
• Protein accession: YP_921616
• Protein GI: 119714651
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.203543
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCACTG GACCCGCCGC GGCGCGACCC GGGGTGTACG CCGACACCGG CGTCTTCGTG 
TGTCTCGAGG GTGGCGAGGG GTCCGGGAAG TCCACCCAGT CCGGACTGCT GCGCGACTGG 
CTCGAGACGC AGGGATTCGA GGTGCTGCTC ACCTTCGAGC CCGGCGATAC CGAGGTGGGA 
CGCAAGCTGC GCGCCATCGT GCTCAGCCCG GAGACCGGTG CGATCTCCGA CCGCACCGAG 
GCGCTGCTCT ACGCCGCGGA CAAGGCCGAG CACGTCGACA CCGTCGTCCA GCCCGCCCTG 
GACCGTGGCG CGGTCGTCAT CACCGACCGC TACGTCGCCT CGATGCTCGC CTACCAGGGC 
GCGGGCCGGG CCCTCGACGT CGGCGAGGTC GAGCAGGTCG CCCGATGGGC GACGCACGAC 
CTACGTCCGC ACCTGACCGT GGTACTCGAC CTCGAGCCCG AGCACGGCCT GGGCCGGTTC 
GAGGAGCGGG ACCGGATCGA GGGGGAGTCC GTGGAGTTCC ACCGCCGCGT GCGGGAAGGC 
TTCTTGGGGA TGGCGGCAGC AGATCCGGAC CACTACCTGG TGCTCGACGC CCGGGGCGAC 
CGCGAGGAGA TCGCCGGCCG GGTCCGCGAC CGCGTCGCCC CCCTGCTCGA CCGGGCGGCC 
CGGCGATGA 

 

Protein sequence

MSTGPAAARP GVYADTGVFV CLEGGEGSGK STQSGLLRDW LETQGFEVLL TFEPGDTEVG 
RKLRAIVLSP ETGAISDRTE ALLYAADKAE HVDTVVQPAL DRGAVVITDR YVASMLAYQG 
AGRALDVGEV EQVARWATHD LRPHLTVVLD LEPEHGLGRF EERDRIEGES VEFHRRVREG 
FLGMAAADPD HYLVLDARGD REEIAGRVRD RVAPLLDRAA RR