| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0381 |
|---|
| Symbol | |
|---|
| ID | 4597767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 410564 |
|---|
| End bp | 411280 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639774995 |
|---|
| Product | L-ribulose-5-phosphate 4-epimerase |
|---|
| Protein accession | YP_921611 |
|---|
| Protein GI | 119714646 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG TCGTCAGCGC CGAGTCCCGC GAGGCGGTAC GCCGGCTGCA GGCGGAGGTC
GCCGCGCTGC ACGCCGAGCT GACCCGCAAC CGGCTGGTCG TGTGGACCGC CGGCAACGTG
TCCGCGCGGG TGCCGGGCAC CGACCTGTTC GTGATCAAGC CGTCGGGGGT CTCCTACGAC
GAGCTGGACG CCGACACGAT GGTCGTCTGC GACCTCGACG GCACCCTGGT CGAGGGGGCG
CGACAGCCGA GCTCCGACAC CGCCGCCCAC GCCTACGTCT ACCGCCACCT GCCCGAGGTC
GGCGGGGTCG TGCACACCCA CTCGACGTAC GCGACCGCGT GGGCCGCCCG CGGCGAGCCG
ATCCCGTGCG TGCTCACGAT GGCGGCCGAC GAGTTCGGCG GCGAGATCCC GATCGGGCCG
TTCGCGCTGA TCGGGGACGA CTCGATCGGC CGCGGGATCG TCGAGACGCT GCGCGAGAGC
CGCTCGCGCG CCGTACTCAT GCAGAACCAC GGCCCGTTCA CCGTCGGGCC CGATGCCCGG
TCCGCCGTCA AGGCGGCCGT GATGGTCGAG GACGTCGCTC GCACGGTGCA CGTCGCCCGC
CAGCTCGGTG CGCCGCTCCC GATCGCCCAG GAGCACGTCG ACGCCCTCTA CGACCGCTAC
CAGAACGTGT ACGGCCAGAC CCAGCAGACC CAGCAACAGA CCGGAGGAGT CGCGTGA
|
|---|
| Protein sequence | MNAVVSAESR EAVRRLQAEV AALHAELTRN RLVVWTAGNV SARVPGTDLF VIKPSGVSYD
ELDADTMVVC DLDGTLVEGA RQPSSDTAAH AYVYRHLPEV GGVVHTHSTY ATAWAARGEP
IPCVLTMAAD EFGGEIPIGP FALIGDDSIG RGIVETLRES RSRAVLMQNH GPFTVGPDAR
SAVKAAVMVE DVARTVHVAR QLGAPLPIAQ EHVDALYDRY QNVYGQTQQT QQQTGGVA
|
|---|
| |