| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0378 |
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| Symbol | |
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| ID | 4597764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 404767 |
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| End bp | 407484 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639774992 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_921608 |
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| Protein GI | 119714643 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.381193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCCACA AGTTGGTCAT CGTCGAGTCG CCGGCGAAGG CCCGCACGAT CGGCGGGTAC
CTCGGCCAGG GGTACGTCGT CGAGTCCTCC ATCGGCCACA TCCGCGACCT CCCGCAGAGC
GCCGCCGACA CCCCCGCGAA GATCAAGGAC AAGCCGTGGG GCCGGCTCGC GGTCGACGTC
GACAACGGCT TCGAGCCGTA CTACGTGGTG CCCCGTGACA AGAAGTCGCA CATCGCCAAG
CTGAAGACCC TCCTCAAGGA GGCGGACGAG CTCTACCTCG CCACCGATGA GGACCGCGAG
GGCGAGGCGA TCGCCTGGCA CCTGCTCGAC GAGCTCAAGC CCAAGGACAT CCCCGTCAAG
CGGATGGTCT TCCACGAGAT CACCAAGCCG GCGATCATCG CCGCCGCGGA GCACCCGCGC
GAGCTCGACA TGGACCTGGT GGAGGCCCAG GAGGCGCGTC GCATCCTCGA CCGGCTCTAC
GGCTACGAGG TCAGCCCGGT GCTCTGGAAG AAGGTCATGT CCGGCCTCTC CGCGGGCCGG
GTGCAGTCCG TCGCGACCCG CCTGGTCGTG GACCGCGAGC GGGAGCGGAT GGCGTTCCGC
GTCGCGTCGT ACTGGGACCT CGAGGGCACC TTCGACGCCG GGGCGACCAA GGAGCCCCGG
ATGTTCCCGG CCAAGGTCCA CTCCGTCGAC GGCAGCCGGG TCGCCGGTGG CTCCGACTTC
GGCCCGGACG GCCTGCTCAA GGCCAAGAAG GGCGAGCGCG TCCACCTGGA CCGCGCCGCT
GCCGAGGCGC TGGTCGCGGC ACTCGCCGAG ACGACGTACG ACGTCCGCTC GGTCGAGGCC
AAGCCGTACC GGCGCTCGCC GTACGCCCCG TTCCGCACCA CCACGCTGCA GCAGGAGGCC
AGCCGCAAGC TCGGCATGAG CGCGTCGGTG ACGATGTCGG TCGCGCAGCG GCTCTACGAG
AACGGCTTCA TCACCTACAT GCGCACCGAC TCGACCACGC TCTCGGGCGG CGCGGTCGAG
GCGGCTCGCG CGCAGGTGCG TGAGCTGTAC GGCGCGGAGT ACCTGCCCGA CACGCCGCGG
ACCTACACGA GCAAGGTGAA GAACGCCCAG GAGGCGCACG AGGCGATCCG CCCGGCCGGC
GACTCGTTCC GCACGCCGGC GCAGACCGGC CTGACCGGTG ACCAGTTCCG CCTCTACGAG
CTGATCTGGA TGCGCACCGT CGCCTCGCAG ATGAAGGACG CGACCGGCCA GTCCGTCTCG
GTCCGGATCG GCGGCGTGGC CGCCGACGGC CGCGACGTCG TGTTCGCCGC GTCCGGCCGG
GTGATCACCT TCCACGGGTT CCTGAAGGCG TACGTCGAGG GCACCGAGGG CGGCAAGCGC
AGCGACGACG ACCAGGTGCC GCTGCCCGAC CTCCACGAGG GTGACGCCGT CTCGGCCGCC
TCGCTGGCCG CCAACGGCCA CGAGACCAAA CCGCCGGCGC GCTACACCGA GGCGACGCTG
ATCAAGGAGC TCGAGGACCG CGAGATCGGC CGGCCGTCGA CGTACGCCTC GATCATCGGC
ACCATCCTCA ACCGCGGCTA CGTCTACAAG AAGGGCACCG CGCTGGTGCC CGCGTGGCTC
GCGTTCTCGG TGACCCGGCT GCTCGAGGAG CACTTCCCGC GGCAGGTCTC CTACGAGTTC
ACCGCGGGCA TGGAGGACGT CCTCGACGAG ATCGCGGGCG GCCGCAAGGA CCTGAAGTCC
GAGCTGAGCG AGTTCTACTA CGGCTCGGAC AGCGTGGTCG GGCTCAAGCC GCTGGTCGAC
GGGCTGGGCG AGATCGACGC GCGCGAGCTC GCGACGTTCC CGATCGGGGG AGCGGACGCC
GGCATCAACC TCCGGGTCGG CCGCTACGGT CCCTACCTGG AGGGCCCCGA CGACGACGGG
ACGGCGTACG CCCGGCGGGC CAACGTGCCC GACGACCTCC CGCCCGACGA GCTCACGCTC
GACAAGGCCA AGGAGCTGCT GGCGAACCCG GCCGGCGAGG AGATCCGGCT GGGCGTGCAC
CCCGACACCG GGCTCGAGGT GGTCGCGAAG AACGGCCGGT TCGGCCCGTA CGTGACCGAG
GTGCTCCCAG AGGACGCCGC GCAGGGTCGG AAGAAGGGGG CGGCCAAGCC GCGCACCGGC
TCGCTGTTCA AGTCGATGTC GCTGGACACG GTCACGCTCG CGGACGCGGT CAAGCTGCTC
TCCCTGCCCC GCGTGGTCGG CGTGGCCGAG GACGGCGAGG AGGTCACCGC CCAGAACGGC
CGCTACGGGC CGTACCTGAA GAAGGGCACC GACTCCCGGT CGCTGGCCTC CGAGGACCAG
CTGCTGACGA TCACCCTCGA CGAGGCGCTG CGGATCTACG CCCAGCCCAA GCAGCGGGGC
CGGGCCGCGG CCGCCGCGCC GCTCAAGGAG CTCGGCAACG ACCCGGTCTC GGGCCAGCCC
GTGGTCGTGA AGGCCGGCCG GTTCGGCGAG TACGTCACCG ACGGCGAGTA CAACGCCACC
CTCCGCAAGG AGGACTCCGT CGAGTCGATC ACCATCGAGC GCGCCGCGGA GCTGCTGGCG
GAGCGCCGGG CCAAGGGCCC GGCGAAGAAG GCGGCCAAGA GGGGTGCGAA GAAGGCGCCG
GCCAAGAAGG CGGCGGCCAA GAAGACCGCT ACCAAGAAGG CGGCCACGAA GAAGGCGACC
GCCAAGAAGG CGACGTAG
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| Protein sequence | MAHKLVIVES PAKARTIGGY LGQGYVVESS IGHIRDLPQS AADTPAKIKD KPWGRLAVDV
DNGFEPYYVV PRDKKSHIAK LKTLLKEADE LYLATDEDRE GEAIAWHLLD ELKPKDIPVK
RMVFHEITKP AIIAAAEHPR ELDMDLVEAQ EARRILDRLY GYEVSPVLWK KVMSGLSAGR
VQSVATRLVV DRERERMAFR VASYWDLEGT FDAGATKEPR MFPAKVHSVD GSRVAGGSDF
GPDGLLKAKK GERVHLDRAA AEALVAALAE TTYDVRSVEA KPYRRSPYAP FRTTTLQQEA
SRKLGMSASV TMSVAQRLYE NGFITYMRTD STTLSGGAVE AARAQVRELY GAEYLPDTPR
TYTSKVKNAQ EAHEAIRPAG DSFRTPAQTG LTGDQFRLYE LIWMRTVASQ MKDATGQSVS
VRIGGVAADG RDVVFAASGR VITFHGFLKA YVEGTEGGKR SDDDQVPLPD LHEGDAVSAA
SLAANGHETK PPARYTEATL IKELEDREIG RPSTYASIIG TILNRGYVYK KGTALVPAWL
AFSVTRLLEE HFPRQVSYEF TAGMEDVLDE IAGGRKDLKS ELSEFYYGSD SVVGLKPLVD
GLGEIDAREL ATFPIGGADA GINLRVGRYG PYLEGPDDDG TAYARRANVP DDLPPDELTL
DKAKELLANP AGEEIRLGVH PDTGLEVVAK NGRFGPYVTE VLPEDAAQGR KKGAAKPRTG
SLFKSMSLDT VTLADAVKLL SLPRVVGVAE DGEEVTAQNG RYGPYLKKGT DSRSLASEDQ
LLTITLDEAL RIYAQPKQRG RAAAAAPLKE LGNDPVSGQP VVVKAGRFGE YVTDGEYNAT
LRKEDSVESI TIERAAELLA ERRAKGPAKK AAKRGAKKAP AKKAAAKKTA TKKAATKKAT
AKKAT
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