| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0372 |
|---|
| Symbol | hppA |
|---|
| ID | 4597758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 396899 |
|---|
| End bp | 399277 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639774986 |
|---|
| Product | membrane-bound proton-translocating pyrophosphatase |
|---|
| Protein accession | YP_921602 |
|---|
| Protein GI | 119714637 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3808] Inorganic pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.110001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGGA TCGTTCCCGC TGTCGTGGAA GTCTCCGGGG GCAATCTCGT CCTGGTCATC
GTCGTCGCAC TGATCGCGCT TGGCGCGCTC GCGATGGCAG CGATGTTCCG CCAGGAAGTG
CTTGCCGCCG GTGAGGGCAC CGACAACATG AAGAACATCG CGCAGGCGGT GCAAGAGGGC
GCGAACGCCT ACTTGCAGCG GCAGTTCCGC ACGTTGGCGA TCTTCGCCGT CGTCGCGTTC
TTCCTGCTGC TCGCGCTGCC CGCCGACGAC GCCATGGTCC GGATCTTCCG GTCCGTGTTC
TTCCTGGTCG GAGCGGGCTT CTCGGCCACC GTCGGCTACC TCGGCATGTC GCTCGCGGTG
AAGGCGAACC TCCGGGTGGC TGCGGCCGCG CAGACCCAGG GCCGCGACCC GGCCATGAAC
ATCGGCTTCC GGACCGGCGC CACCGTCGGC ATGCTGACCG TCGGCCTCGG CCTGCTCGGC
GCCAGCGTCG TGGTGATCCT GTTCCAGGAG GACGCCCCGC ACGTGCTGGA GGGCTTCGGC
TTCGGTGCGG CGCTGCTCGC GATGTTCATG CGTGTCGGCG GCGGCATCTT CACCAAGGCC
GCCGACGTCG GCGCCGACCT GGTCGGCAAG GTCGAGAACA ACATCCCCGA GGACGACCCG
CGCAATGCCG CGACGATCGC GGACAACGTC GGCGACAACG TCGGCGACTG CGCGGGCATG
GCTGCCGACC TGTTCGAGTC CTACGCCGTG ACCCTGGTCG CGGCGCTGAT CCTGGGCTCC
CAGGCCTTCG GCGACAAGGG CCTGGTGTTC CCGCTGCTGA TCCCCGCGAT CGGTGCCCTG
ACCGCCGTCG TCGGGGTGTA CCTCTGCAAG CCGCGGGCCG GCGAGAACGG CCTGACCACG
ATCAACCGGG CGTTCTACAT CTCCGCCGCG ATCGGCGCGG TCGCGAGCAT CATCCTGGCC
CTGGTCTACC TGCCGGGCGA CTTCGCCGAC CTGACGAACT CCACGGTCGA CGCCGACGCC
AGCCCGCGTG TCGTCGCCGC CCTGGCCGTG CTCATCGGCA TCGTGCTCGC CGCCGCGATC
CTCGGCCTCA CCGGCTACTT CACCGGCACC GACCACCGGC CGGTCAAGGA CGTCGGCAAG
ACCTCGCTCA CGGGCGCGGC GACCGTGATC CTGTCCGGCC TGTCGGTCGG CTTCGAGTCG
GCCGTCTACA CGACCCTGGT CATCGGCGCG GCGGTCTTCG GCGCGTTCCT GGTCGGTGCC
GGCTCGATCC CGGTCGCGCT GTTCGCGGTC GCGCTGGCCG GCTGCGGCCT GCTGACCACC
GTCGGCGTGA TCGTCGCGAT GGACACCTTC GGCCCGGTCT CCGACAACGC CCAGGGCATC
GCGGAGATGT CCGGCGACGT CGACGAGCAC GGCGCGCAGA TCCTGACCGA GCTCGACGCG
GTCGGCAACA CCACGAAGGC GATCACCAAG GGCATCGCGA TCGCGACGGC GGTGCTCGCC
GCGAGCGCGC TGTTCGGCTC CTACACGAAC GCCCTCCAGG ACGCCATCGA CGAGGTCACC
CTCACCGAGG AGCCCGGCGC GCTCACCAGC CTGGCGTTCT CGTTCAACGC GTCCTACCCG
AACATCCTGG TCGGCATGCT GCTCGGTGCG GCCGTGGTGT TCCTGTTCTC CGGGCTCGCG
ATCAACGCGG TCGGCCGCGC TGCCGGCGCG GTGGTCTACG AGGTGCGCCG CCAGTTCCGG
GAGATCCCCG GGATCATGGA GGGCACCGGC CGCCCGGAGT ACGGCCGTGT GGTCGACATC
GTGACCCGCG ACTCGCTGCG TGAGCTGGCC ACCCCGGGCC TGCTCGCGAT CCTGGCACCG
ATCGCCGTCG GCTTCGGCCT CGGCGTCGGT CCGCTGGCCG GCTTCCTGGC CGGTGCGATC
GCCACCGGCA CGCTGATGGC GGTGTTCCTG GCCAACTCCG GTGGCGCCTG GGACAACGCG
AAGAAGCTGG TCGAGGACGG CAACCACGGC GGCAAGGGCT CGGACGCGCA CGCCGCGACG
GTCATCGGCG ACACCGTCGG CGACCCGTTC AAGGACACCG CCGGCCCGGC GATCAACCCG
CTGCTCAAGG TGATGAACCT GGTCTCGCTG CTGATCGTCG CCGCCATCGT GAAGCTGTCG
ATCGGCGAGG ACGCGAACAC CCCGCTGCGG ATCGTGATCG CCCTGGCGGC GTTCGCGGGC
ATCGTCGCCG CGGTGTACGT CTCCAAGCGG CGCCCGGTCC ACATCGAGGG CGACGACGAC
GGTACGACGG CTCCCCCGCC GCCTCCGCCG CCGGTCGAGG CCGTGCCGCC GACGGAGCCC
GCTCCGACCC AGCAGTTCGA GGCGCCCCAG CAGCACTAG
|
|---|
| Protein sequence | MTGIVPAVVE VSGGNLVLVI VVALIALGAL AMAAMFRQEV LAAGEGTDNM KNIAQAVQEG
ANAYLQRQFR TLAIFAVVAF FLLLALPADD AMVRIFRSVF FLVGAGFSAT VGYLGMSLAV
KANLRVAAAA QTQGRDPAMN IGFRTGATVG MLTVGLGLLG ASVVVILFQE DAPHVLEGFG
FGAALLAMFM RVGGGIFTKA ADVGADLVGK VENNIPEDDP RNAATIADNV GDNVGDCAGM
AADLFESYAV TLVAALILGS QAFGDKGLVF PLLIPAIGAL TAVVGVYLCK PRAGENGLTT
INRAFYISAA IGAVASIILA LVYLPGDFAD LTNSTVDADA SPRVVAALAV LIGIVLAAAI
LGLTGYFTGT DHRPVKDVGK TSLTGAATVI LSGLSVGFES AVYTTLVIGA AVFGAFLVGA
GSIPVALFAV ALAGCGLLTT VGVIVAMDTF GPVSDNAQGI AEMSGDVDEH GAQILTELDA
VGNTTKAITK GIAIATAVLA ASALFGSYTN ALQDAIDEVT LTEEPGALTS LAFSFNASYP
NILVGMLLGA AVVFLFSGLA INAVGRAAGA VVYEVRRQFR EIPGIMEGTG RPEYGRVVDI
VTRDSLRELA TPGLLAILAP IAVGFGLGVG PLAGFLAGAI ATGTLMAVFL ANSGGAWDNA
KKLVEDGNHG GKGSDAHAAT VIGDTVGDPF KDTAGPAINP LLKVMNLVSL LIVAAIVKLS
IGEDANTPLR IVIALAAFAG IVAAVYVSKR RPVHIEGDDD GTTAPPPPPP PVEAVPPTEP
APTQQFEAPQ QH
|
|---|
| |