| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0350 |
|---|
| Symbol | |
|---|
| ID | 4595644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 373204 |
|---|
| End bp | 375246 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639774965 |
|---|
| Product | assimilatory nitrate reductase (NADH) alpha subunit apoprotein |
|---|
| Protein accession | YP_921581 |
|---|
| Protein GI | 119714616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.11041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA CCCACTGCCC CTACTGCTCG CTCCAGTGCG GCATGCGCCT CGAGGGTGGC
CGCCGGCTGG AGGTGCGGCC GTGGCCGGAG TTCCCCGTCA ACGAGGGCGC GCTGTGTCGC
AAGGGCTGGA CGGCGGCCGG CCTGCGCGGC CACCGCGAGC GGCTCACGAC GCCGCTGATC
CGGGACCGGG CCACGGGTGA GCTCCGCGCG GCCGGCTGGG ACGAGGCACT CGACCTGGTC
GCCAGCCGGC TGTGCGGCCT GCGCGACGAG CACGGCCCGG ACTCCGTCGC GGTGTTCGGG
GGCGGCGGGT TGACCAACGA GAAGGCCTAC CAGCTGGGCA AGCTGGCCCG GGTCGCGCTC
GGCACCAGCC AGGTCGACTA CAACGGCCGG TGGTGCATGT CGTCGGCGGC CTCGGCCGGC
AATCGGGCTC TCGGGATCGA CCGCGGCCTG CCGTTCCCGC TCGCGGACGT CGAGCACACC
GACGTGCTGG TGCTCGTGGG ATCCAACCTC GCGGAGACCA TGCCCCCCGC CGCGCGCCAC
CTCGACCGGC TCCGCGAGAA CGGCGGCCGC GTGGTCGTCG TCGACCCCCG GCGTACCCCC
ACCGCCGAGC GCGCCGACCT GTTCCTCCAG CCGGTCCCGG GCACCGACCT GCCGCTCGCG
CTCGGCCTGC TGCACCTGCT CGACGCTGCG GGTGCGGTCG CCGAGGAGTA CGTCGCCGCG
CGGACGACCG GCTGGGAGGA GGTCCGCCGC TCGCTCGCCG GATGGTGGCC CGAGCGGGTC
GAACGGGTCG CCGGCGTCCA GGCGTCGCAA CTGCGGGAGT GCGCGGACCT GCTGGCCGGT
GCCGAGCGGG TGATGGTCCT GACCGCCCGC GGCGCCGAGC AGCACGCCCA GGGCACCGAC
ACCGTGCTCG CCTGGATCGA CCTGGCGCTG GCGCTCGGCA TGCCCGGCAA GCAGTACGCC
GGCTACGGCT GCCTCACCGG GCAGGGCAAC GGACAGGGCG GCCGGGAGCA CGGGCAGAAG
GCCGACCAGC TGCCGGGCTA CCGGATGATC GACGACCCCT TGGCGCGCGA CCACGTGGCC
GAGGTCTGGG GAGTCTCCAC GGACTCGCTG CCCGGGCCGG GCCGCTCGGC GTACGAGCTG
CTCGACTCCC TCGGCACCGG CGGCGGTCCG CGGGCCTTGC TGGTGGTCGG CAGCAACATC
GTGGTCTCGG CCCCGAACGC CACCCACGTG GCGTCCCGGC TCGCCGCGCT CGACCTGCTC
GTGGTGGCCG ACCTCGTGCT GAGCGAGACC GCGGCGCAGG CCGACGTCGT CCTGCCGGTC
GCGCAGTGGG CGGAGGAGAC CGGCACGATG ACCAACCTCG AAGGGCGGGT GATCCTGCGT
GAGCGGGCCG TCGCCCCGCC CGAGGGGGTG CGCACCGACC TCGAGGTGAT CGCCGGTCTC
GCCGAGCGGC TCGGCTCGCC GGTGCCGTTC GCCGTCGATC CCGAGGAGGT CTTCGCCGAG
CTCGGCCGGG CCTCGAGCGG CGGGCGCGCC GACTACTCCG GCATCGGCTA CGACCGGATC
CGCGACGAGC ACGGGGTGTT CTGGCCGTGC CCGTCGCCCG ACCACCCGGG GACCCCGCGG
CTGTTCGCCG AGTCCTTCCC CACGGCCGAC GGCCGCGCCC GCTTCGTCGC GGTCGAGCAC
CGCGGTCCGG CCGAGCCGAC CGACCCGTCG TACCCGATCC ACCTGACGAC CGGCCGGGTG
CTCGCGCAGT ACCAGTCCGG CGCGCAGACC CGGCGGGTCC GCGAGCTGCC CGACGAGGGC
CCGTTCGTCG AGATGCACCC GATGCTCGCG GCGCGGATCG GCGCGCACGA CGGCCAGCAG
GTGGTCGTCA CCACGCGCCG CGGCGAGCTC AGGGTGCCCG CGCGGGTGAC GGCCACGATC
CGTCCGGACA CCGTGTTCGT GCCCTTCCAC TGGGTCGGCG CCAACCGGCT CACCCACGAC
GCCCTCGACC CGGCCAGCCG GATGCCGGAG TTCAAGGTGT GCGCCGCGGC GGTGCGCGCA
TGA
|
|---|
| Protein sequence | MTQTHCPYCS LQCGMRLEGG RRLEVRPWPE FPVNEGALCR KGWTAAGLRG HRERLTTPLI
RDRATGELRA AGWDEALDLV ASRLCGLRDE HGPDSVAVFG GGGLTNEKAY QLGKLARVAL
GTSQVDYNGR WCMSSAASAG NRALGIDRGL PFPLADVEHT DVLVLVGSNL AETMPPAARH
LDRLRENGGR VVVVDPRRTP TAERADLFLQ PVPGTDLPLA LGLLHLLDAA GAVAEEYVAA
RTTGWEEVRR SLAGWWPERV ERVAGVQASQ LRECADLLAG AERVMVLTAR GAEQHAQGTD
TVLAWIDLAL ALGMPGKQYA GYGCLTGQGN GQGGREHGQK ADQLPGYRMI DDPLARDHVA
EVWGVSTDSL PGPGRSAYEL LDSLGTGGGP RALLVVGSNI VVSAPNATHV ASRLAALDLL
VVADLVLSET AAQADVVLPV AQWAEETGTM TNLEGRVILR ERAVAPPEGV RTDLEVIAGL
AERLGSPVPF AVDPEEVFAE LGRASSGGRA DYSGIGYDRI RDEHGVFWPC PSPDHPGTPR
LFAESFPTAD GRARFVAVEH RGPAEPTDPS YPIHLTTGRV LAQYQSGAQT RRVRELPDEG
PFVEMHPMLA ARIGAHDGQQ VVVTTRRGEL RVPARVTATI RPDTVFVPFH WVGANRLTHD
ALDPASRMPE FKVCAAAVRA
|
|---|
| |