Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0340 |
Symbol | |
ID | 4597977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 362084 |
End bp | 362815 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639774955 |
Product | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_921571 |
Protein GI | 119714606 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCTCGCC GTACCCTTGG GCCCGTGCCC GCAGTCCCCG AGTCCCGCAC CGGTCTGGTC CGGCGCGCCC GCAAGATCGA CCGGCTGCTC GCGGAGACCT ACCCCGATGC CAGGTGCGAG CTGGACTTCG ACAACCCCTT CGAGCTGCTC GTCGTCACCG TGCTGTCGGC GCAGACCACC GACAAGCGGG TCAACGCGGT GCGGCCCACC CTGTTCGCGG CCTACCCCGA CGCGAGGACG ATGGCCGGCG CGGACCGCGC GACGCTCGAG GGCATCGTGG GGCCGTTGGG CTTCTTCCGT GCCAAGACCG AGTCGCTGCT CAAGCTGAGC GCCGCGCTGG TCGAGCGCCA CGGCGGCGAG GTGCCGCCCC GGCTCGACGA CCTGGTGCAA CTGCCCGGCG TCGGGCGCAA GACCGCGAAC GTCGTGCTCG GCAACGCCTT CGGCATCCCC GGCATCACCG TCGACACCCA CTTCGGTCGG CTGTCCCGCC GGTTCGCCTG GACGGAGGAG ACCGACCCGG TCAAGGTCGA GCACGCCGTC GGCGCCCTGT TCGAGAAGCG CGACTGGACG ATGCTCAGCC ACCACCTGAT CTGGCACGGT CGGCGGATCT GCCACGCCCG CAACCCCGCC TGTGGGGCGT GCCCGGTCGC GCGCTGGTGC CCGGCGTACG GCGAGGGGCC GACCGACCCG GCCGCCGCGG CGAAGCTGGT GAAGACCGAG GGCAGGGCAT GA
|
Protein sequence | MPRRTLGPVP AVPESRTGLV RRARKIDRLL AETYPDARCE LDFDNPFELL VVTVLSAQTT DKRVNAVRPT LFAAYPDART MAGADRATLE GIVGPLGFFR AKTESLLKLS AALVERHGGE VPPRLDDLVQ LPGVGRKTAN VVLGNAFGIP GITVDTHFGR LSRRFAWTEE TDPVKVEHAV GALFEKRDWT MLSHHLIWHG RRICHARNPA CGACPVARWC PAYGEGPTDP AAAAKLVKTE GRA
|
| |