Gene Noca_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0313 
Symbol 
ID4597947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp333454 
End bp334545 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content74% 
IMG OID639774926 
ProductATPase domain-containing protein 
Protein accessionYP_921544 
Protein GI119714579 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0134516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGGC CGCGGTTCGC AGCGCGGCTG CTCGTCGCCC AGGCCCTGGT GCTGCTGGCC 
GGGGCGCTCA CCACCTGGCT GGTGGCGTCG GTGGTCGGCC CCGGCATCTT CCACGACCAC
CTCGAGCAGG CCGGGGTGGC GCACACCGCG TCGGAGACCG AGCACGTCGA GGACGCCTTC
GCGTCCGCGC TGCTCATCTC GATCGCCCTC GCCCTGGTCG CCTCGGTGCT GGCCGCCCTG
GCCGTCTCCT GGTACTTCAG CCGGCGGGTG CAACGCTCGA TCGGCAACGT GGCTGACGCC
GCCGCGCAGA TCGCTGCCGG GGAGTACGGC GCCCGGGTGC GCGATCCCGG CCTGGGCGGG
GAGTTCTCCA CGCTCGCCAC CTCCTACAAC CGGCTGGCGT CGCGGCTGGA AGCCACCGAG
ACGACCCGGC GGCGGATGCT GGCCGACCTG GCGCACGAGA TGCGTACGCC GCTGGCCACG
ATCGAGGCGC ACCTCGAAGC GGTGGAGGAC GGGGTCCGCC CCCTCGATGC CGACACCCTC
GCCGTCATCG GATCGGCCAC CAGCCGGATG CGCCGGTTGG CCGAGGACGT CGCCGCCGTG
TCGACCGCGG AGGAGGGCAG CCTGCAGATC GAGAAGCGGC GGGTCGCAGC ACTGGACCTG
GCACGGACCG CGGCCGACCT CGTGCAGGAC CGGTTCGACG CCAAGGGCGT CCGGCTGCAC
CGCGAACTCG AGGACGCCGG CCGGCTCGAG GTCGACCCCG AGCGGATCGG CCAGGTCCTC
GGCAACCTCC TCGACAACGC ACTGCGGCAC ACCCCGACCG GCGGAGCCGT GAGGCTGTCC
TGCCGCCGCA TCGACTCCTG GGTCGAGTAC CAGGTCGCCG ACACCGGCGA GGGCGTGACC
GCCGAACACC TGCCGCACCT CTTCGACCGC TTCTACCGCG CCGACGCCGC TCGCGACCGC
GCGCACGGCG GCTCCGGCAT CGGCCTCGCG ATCGCCAAGG CGCTGGTCGA GGGGCACGGC
GGGGGGATCT TCGCGACCAG CGAGGGTCGG GGCCGCGGCG CCACCTTCAC CGTGCGGCTG
CCGGACCGGT AG
 
Protein sequence
MTRPRFAARL LVAQALVLLA GALTTWLVAS VVGPGIFHDH LEQAGVAHTA SETEHVEDAF 
ASALLISIAL ALVASVLAAL AVSWYFSRRV QRSIGNVADA AAQIAAGEYG ARVRDPGLGG
EFSTLATSYN RLASRLEATE TTRRRMLADL AHEMRTPLAT IEAHLEAVED GVRPLDADTL
AVIGSATSRM RRLAEDVAAV STAEEGSLQI EKRRVAALDL ARTAADLVQD RFDAKGVRLH
RELEDAGRLE VDPERIGQVL GNLLDNALRH TPTGGAVRLS CRRIDSWVEY QVADTGEGVT
AEHLPHLFDR FYRADAARDR AHGGSGIGLA IAKALVEGHG GGIFATSEGR GRGATFTVRL
PDR