Gene Noca_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0296 
Symbol 
ID4596007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp314330 
End bp315811 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content72% 
IMG OID639774910 
Producthypothetical protein 
Protein accessionYP_921528 
Protein GI119714563 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAGAG GCACCGACAT CCCCGCCGTC CTCCCGGCCG AGCTGCTGGC CGACGCGCCG 
TCGTACGACG TCGTGGTCGT CGGGTTCGGC ATCGCCGGTG GCTGCGCCGC GCTCGAGGCC
GCGCGTGCGG GGGCGCGGGT GCTGCTCCTG GAGCGCGCGG CGGTGCACGG CGGCACCTCC
AGCCTGTCCG GCGGCCACTT CTACCTCGGC GGCGGGACGG CCGTGCAGGT GGCGACCGGA
CACGATGACA CCCCCGAGGA GATGTACAAG TACCTCGTCG CCGTCTCGAA GGAGCCCGAG
CACGACAAGA TCCGCGCCTA CTGCGAGGGC TCGGTCGAGC ACTTCGACTG GCTCGAGGCG
CTGGGCTTCG AGTTCGAGCG CACCTACTAC CCCGAGAAGG CGGTGATCCA GCCGGGGACC
GAGGGGCTGA TGTACACGGG CAACGAGAAG GTGTGGCCCT ACCGGGAGCA GGCGCGGCCG
GCGCCGCGCG GCCACAAGGT GCCGGTGCCC GGGGACACCG AGGGCACCAG GATGGTGATG
GACCTGCTGC ACGAGCGGGT CGAGGAGGCG GGCGTCGAGG TCCGCTACGA GACCGGCGCG
ACCAACCTGG TCGCCGACGG GTCCGGCACC GTCCGCGGGC TGGCCTGGAG GTCCTTCGAG
GAGACCGGGT ACGTCGCCGC CGCCGGGGTC GTGATCGCGG CCGGCGGCTT CGTGATGAAC
CCGGACATGG TCGCCGCGCA CACCCCGCGG CTGGCGGAGA AGCCGTTCAC GCTGGGGTCG
ACGTACGACG ACGGCCTCGG CATCCGGCTC GGCGCGTCGG CCGGCGCGGA GCTCAAGCAC
ATGGACGAGC CGTTCATCAC CGCGCCGTTC TACCCACCGT CGGCGCTGGT CACCGGCTTC
CTCGTGAACA AGCTCGGCGA GCGGTTCTGC GCCGAGGACT CCTACCACTC GCGCACCTCG
CAGTTCGTGA TGGAGCAGCC CGACTCCACG GCGTACCTCA TCGTCGACAG CGAGCACGTG
GAGTACCCGA AGTTCCCGCT GGTGCCGCTG ATCGACGGCT TCGAGACGAT CTCCGAGCTC
GAGGACGCGC TCGAGCTGCC GGCCGGGTCG GTCGCCAAGA CGCTGGAGCG CTACAACGAG
CTCGCCGAGG CCGGGGAGGA CGCCGACTTC CACAAGGCGC CCGAGTGGCT GGCGCCGCAG
GGCGCCGGCC CGTGGGCGGT CTTCGACCTG CGGCTGGGCC ACGCGATGTA CGCCGGCTTC
ACCCTGGGTG GGCTGCGGGT GAGCGTGGAC GGCGAGGTCG AGCGCCCCGA CGGCTCGGTG
ATCCCCGGCC TCTACGCCGC CGGCGCCTGC GCGTCCAACA TCGCCCAGGA CGGCAAGGGC
TACTGCTCGG GCACCCAGCT CGGTGAGGGG TCGTTCTTCG GCCGCCGGAG CGGGCGAGCC
GCCGCTGCCA GTGCGAGCGC AGCGAGCACG GGCAGCGGAT AG
 
Protein sequence
MGRGTDIPAV LPAELLADAP SYDVVVVGFG IAGGCAALEA ARAGARVLLL ERAAVHGGTS 
SLSGGHFYLG GGTAVQVATG HDDTPEEMYK YLVAVSKEPE HDKIRAYCEG SVEHFDWLEA
LGFEFERTYY PEKAVIQPGT EGLMYTGNEK VWPYREQARP APRGHKVPVP GDTEGTRMVM
DLLHERVEEA GVEVRYETGA TNLVADGSGT VRGLAWRSFE ETGYVAAAGV VIAAGGFVMN
PDMVAAHTPR LAEKPFTLGS TYDDGLGIRL GASAGAELKH MDEPFITAPF YPPSALVTGF
LVNKLGERFC AEDSYHSRTS QFVMEQPDST AYLIVDSEHV EYPKFPLVPL IDGFETISEL
EDALELPAGS VAKTLERYNE LAEAGEDADF HKAPEWLAPQ GAGPWAVFDL RLGHAMYAGF
TLGGLRVSVD GEVERPDGSV IPGLYAAGAC ASNIAQDGKG YCSGTQLGEG SFFGRRSGRA
AAASASAAST GSG