| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0292 |
|---|
| Symbol | |
|---|
| ID | 4596003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 309655 |
|---|
| End bp | 311022 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639774906 |
|---|
| Product | VWA containing CoxE family protein |
|---|
| Protein accession | YP_921524 |
|---|
| Protein GI | 119714559 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.298693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGG TCGACCGCCA CATCGCGTTC CTGGAGTCCC TGCGGGGCGC CGGGATGTCG
GTCTCGCTCG CCGAGGACCT CGACGCGCTG CGGGCACTGC GGGCGCTGGA CTGGGACGAC
CGGGCGACGG TGCGAGCCGG GTACGCCGCC ACACTGGTCA AGAAGCAGTC GCAGCGACCG
ACCTTCGACG CGCTCTTCGA CGTCTACTTC CCGCGGATGG TCGGCGCCGG CGCGGCCGCG
GGCGACCTCG AGGACCCCGA CACCGGGGTC CGCGACAACG CCGACGCGCT GGCCCGGTTC
CGCGAGCAGC TCGCCGAGGC GATGGCGACC GGAGACCGGC AGGCGATGGT GGCGCTCGCC
GCCGAGATGG TCGCCCGGTT CGGCGCGATG CCGGGTCGAG GCCCGGGGCT GTCCTCGTGG
TCGGCCTACA CCGCGCTGCA GCGCGTCGCA CCGGGCGAGC TGGTCGACCG GATCGTGCAG
GCGCTGTTGG CCGAGGGCCT GAGCGAGGAC GAGGCCCGGC GAGAGGCCGG GCGCCGGCTC
GGGTCGTTCA CGACGCTGGT CGAGGGGGAC GCCCGGCGCC GGATCGCCGA GGAGAAGGGT
CCCGAGCACG TCGCGAACGT CGCGGTCCGG CCGACCATCG ACCGGCTCGA CTTCACGGCG
GCCCGCAAGG CCGACCTCGA GGAGATGCGG CGCGAGATCT ACCCCCTCGC CCGGCGGCTG
GCCACCCGCC TGACCCAGGA GCACCACGCC CGGAGACGCG GTCCGCTGGA CTTCCGGCGC
ACCATGCGCG CGGCCATGTC CACCGGCGGC GTCCCGCTCG TCACCCACCA CCGGCCCAAG
CGCCCGCACC GCACCGAGCT GGTCGTGCTC TGCGACGTGA GCGGGTCGGT CGCGAACTTC
GCGCAGTTCA CCCTGCTCCT CGTCTACGCC CTGCAGGACC AGTTCGGATC GGTCCGCGCG
TTCACGTTCA TCGACCACGT CCACGAGGTC ACCGGGCACT TCAAGCCGGG CGCGGACCCG
GCCGAAGTGA TGGCGGACCT GGCCGCGAGC ACCGCGCACG CGGCGTTGTG GGGCCGCACC
AACTACGGGC GCGCGTTCGC GAAGTTCGAG GAGCAGCACG CCGACGCGCT CGGCCCGAAG
TCCGCGCTCC TGATCCTCGG GGACGCGCGC TCGAACTACA GCGACCTGCA CCTCGACGTG
CTGAAGCGGC TCGCCGGGTC CGCGCGGCAC TCGTGGTGGC TCAACCCCGA GCACCGCCGG
CACTGGGACA CCGGCGACTC CGCGGCGACC AGGTACGGCG CGGTGGTGCC GATGGTGGAG
TGCCGGAACC TGACGCAGCT GGGTGAGTTC GTGCACGACA TCCTGTGA
|
|---|
| Protein sequence | MSLVDRHIAF LESLRGAGMS VSLAEDLDAL RALRALDWDD RATVRAGYAA TLVKKQSQRP
TFDALFDVYF PRMVGAGAAA GDLEDPDTGV RDNADALARF REQLAEAMAT GDRQAMVALA
AEMVARFGAM PGRGPGLSSW SAYTALQRVA PGELVDRIVQ ALLAEGLSED EARREAGRRL
GSFTTLVEGD ARRRIAEEKG PEHVANVAVR PTIDRLDFTA ARKADLEEMR REIYPLARRL
ATRLTQEHHA RRRGPLDFRR TMRAAMSTGG VPLVTHHRPK RPHRTELVVL CDVSGSVANF
AQFTLLLVYA LQDQFGSVRA FTFIDHVHEV TGHFKPGADP AEVMADLAAS TAHAALWGRT
NYGRAFAKFE EQHADALGPK SALLILGDAR SNYSDLHLDV LKRLAGSARH SWWLNPEHRR
HWDTGDSAAT RYGAVVPMVE CRNLTQLGEF VHDIL
|
|---|
| |