Gene Noca_0273 details

Gene Information

• Locus tag: Noca_0273
• ID: 4596157
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 295784
• End bp: 296350
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 639774886
• Product: 2'-5' RNA ligase
• Protein accession: YP_921505
• Protein GI: 119714540
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1514] 2'-5' RNA ligase
• TIGRFAM ID: [TIGR02258] 2'-5' RNA ligase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGGATGT TCGTGGCGCT GGTGCCGCCG GCCGAGGCGG TCGAGCACCT GGACGCGTTC 
CTCGAGCCGC GGCGCTCGGC TGCGGCGTTC CGGTGGGCCG GTGTCGAGCA GCTGCACGTG 
ACTGTGGCGT TCCTGGCCGA GGTCGAGGAG CGCCGGCTCG AGGACCTGGT CGAGCGGCTC 
GGGCGCGCGG CGGCCCGCCG GTCCGCGTTC GACACCGCGA TCACGGGTGG CGGCGCGTTC 
CCGAACGTGG GGCGGGCCCG GGTGCTCTGG GCGGGCCTCG CGCTCGATGA GCACGGCCGC 
ACCCAGCTCG ACCGACTCGC CACCGGCTGT CGGACCGCCG CCAACCGGGC CGGCGTCCCG 
GTCGACGGGC AGCGCTTCCG GCCGCACCTC ACCGTCGCCA GGATCGCGCA CCCCACGGAG 
GCGACCAGCT GGGTCCGGCT CCTCGACGGG TACGCCGGAC CCGCATGGCG GGCCGACCGG 
GTCGAGCTGG TGGCGTCGTA CCTCGGCGAG GGCCCGCGCG GGCGGCCGCG CTACGAGACG 
GTCGCCGAGC TGGAGCTCGC CGGGTAG 

 

Protein sequence

MRMFVALVPP AEAVEHLDAF LEPRRSAAAF RWAGVEQLHV TVAFLAEVEE RRLEDLVERL 
GRAAARRSAF DTAITGGGAF PNVGRARVLW AGLALDEHGR TQLDRLATGC RTAANRAGVP 
VDGQRFRPHL TVARIAHPTE ATSWVRLLDG YAGPAWRADR VELVASYLGE GPRGRPRYET 
VAELELAG