| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0269 |
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| Symbol | |
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| ID | 4596153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 289765 |
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| End bp | 291966 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639774882 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_921501 |
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| Protein GI | 119714536 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.537346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGGTCT GGCCGGGACG GGCGTACCCG CTCGGGGCGA CGTTCGACGG GAGCGGGACG
AACTTCGCCC TCTTCAGCGA GGTCGCCGAC CGCGTCGAGC TGTGCCTCTT CGACGCAGAG
GGCTCGGAGG GATACCGGGA GACCCGCGTC GAGCTCACCG AGGTCGACGC CTACGTGTGG
CACTGCTACC TGCCCGCCGT ACAGCCGGGC CAGCGCTACG GCTACCGGGT ACACGGGCCC
TGGGACCCGG AGAACGGACA GCGCTGCAAC CCGAACAAGC TGCTGCTCGA CCCGTACGCC
AAGGCCACCA GCGGTGAGAT CGACTGGGAC CAGAGCCTGT TCTCCTACAA CTTCGGCGAC
CCCGAGGACA GCGACGCGCG CAACGACGAG GACTCCGCCC CGCACATGAC CCACGGGGTC
GTGATCAACC CCTTCTTCGA CTGGGAGGGC GACCGCCGGC TCGACTACGA CTACAACGAG
TCGATCATCT ACGAGGCACA CGTCAAGGGC CTCACGCAGC TCCACCCCGA CATCCCCGAG
GAGCTGCGGG GGACGTACGC CGCCCTCGGG CACCCGGCGA TCACCGAGCA CCTGACCAAG
CTCGGCGTGA CCGCGATCGA GCTGATGCCG GTGCACCAGT TCATCCAGGA CAGCACGCTG
CTGGACAAGG GCCTGCGCAA CTACTGGGGC TACAACACCC TGGGCTTCTT CGCTCCGCAC
GCCGACTATG CCGCCACCGG GCAGCCCGGC CAGCAGGTGC AGGAGTTCAA GTCGATGGTC
AAGGCGATGC ACGCCGCGGG CATCGAGGTG ATCCTCGACG TGGTCTACAA CCACACCGCG
GAGGGCAACC ACCTCGGCCC CACGCTGAGC TTCAAGGGCA TCGACAACGC GGCGTACTAC
CGGCTGGTCG AGGACGACCA GCGCTACTAC ATGGACTACA CCGGCACCGG CAACAGCCTC
AACGTGCGGC ACCCGCACTC GCTGCAGCTG CTGATGGACT CGCTGCGGTA CTGGGTCACC
GAGATGCACG TCGACGGCTT CCGCTTCGAC CTCGCCTCGA CGTTGGCTCG CGAGTTCTAC
GACGTCGACC GGCTCTCGAC GTTCTTCGAG CTCGTGCAGC AGGACCCAGT GGTCAGCCAG
GTCAAGCTGA TCGCCGAGCC GTGGGACATC GGCCCCGGCG GCTACCAGGT CGGCGGCTTC
CCGCCGCAGT GGACGGAGTG GAACGGCAAG TATCGCGACA CCGTCCGCGA CTTCTGGCGC
GGCGAGCCGT CGCTGGGCGA GTTCGCCTCG CGGCTCGCCG GGTCGGCCGA CCTCTACGAG
CACTCCGGCC GCCGGCCGGT GGCCAGCATC AACTTCGTCA CCGCCCACGA CGGCTTCACC
CTGCGCGACC TGGTCTCCTA CGACGAGAAG CACAACGAGG CGAACGGCGA GGACAACAAC
GACGGCGAGA GCCACAACCG CTCGTGGAAC CACGGTGTCG AGGGCCCCAC CGACGACCCC
GAGATCCTCG AGTTCCGCGC CCGGGAGCAG CGCAACTTCA TCGCGACGCT ACTGCTGAGC
CAGGGCGTGC CGATGCTGCT CCACGGCGAC GAGATGGGCC GCACCCAGCA GGGCAACAAC
AACACCTACG CCCAGGACTC CGAGCTGAGC TGGGTGCACT GGGACGAGGC CGACAAGCCG
CTGGTCGAGT TCACCGCGGC GCTGTCCCGG CTGCGGCGCG CCCATCCCAC GTTCCGGCGC
AAGCGGTTCT TCACCGGTGG CACCGTCCGG GTCCCCGATG GGGGCGACGG CGACCGGCTC
AACGACATCG TCTGGCTGCA CCTCGACGGC CGGCCGATGG AGGACAACGA CTGGACCCAG
TCGGATTCCG GGGCAGGGGC ACAGGCCCTC GGCATGTACC TCAACGGGCA CGGGATCGCC
GGCCGTGACG AACGCGGCGG GCCGATCGTC GACAACCACT TCCTGCTCTA CTTCAACGCC
GACGGGCCGG CCGAGGTGAC CCTCCCCCCG GACGAGTACG CCGACGCCTG GGACGTGGTC
GTCGACACCG GCGGCCTGGT GGACGACCAG ACCGCGTTGG CCGCCGGGTC GACCTGCTCG
ATGGCGTCGC GCAGCCTGAT CGTGCTCCGC GAGCACCGCG AGCCGGAGGC CGAGGTCGAC
CACTCGGTGG CAGCGTCGGT CGCCCAGGCC CGCCGGGGCT GA
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| Protein sequence | MQVWPGRAYP LGATFDGSGT NFALFSEVAD RVELCLFDAE GSEGYRETRV ELTEVDAYVW
HCYLPAVQPG QRYGYRVHGP WDPENGQRCN PNKLLLDPYA KATSGEIDWD QSLFSYNFGD
PEDSDARNDE DSAPHMTHGV VINPFFDWEG DRRLDYDYNE SIIYEAHVKG LTQLHPDIPE
ELRGTYAALG HPAITEHLTK LGVTAIELMP VHQFIQDSTL LDKGLRNYWG YNTLGFFAPH
ADYAATGQPG QQVQEFKSMV KAMHAAGIEV ILDVVYNHTA EGNHLGPTLS FKGIDNAAYY
RLVEDDQRYY MDYTGTGNSL NVRHPHSLQL LMDSLRYWVT EMHVDGFRFD LASTLAREFY
DVDRLSTFFE LVQQDPVVSQ VKLIAEPWDI GPGGYQVGGF PPQWTEWNGK YRDTVRDFWR
GEPSLGEFAS RLAGSADLYE HSGRRPVASI NFVTAHDGFT LRDLVSYDEK HNEANGEDNN
DGESHNRSWN HGVEGPTDDP EILEFRAREQ RNFIATLLLS QGVPMLLHGD EMGRTQQGNN
NTYAQDSELS WVHWDEADKP LVEFTAALSR LRRAHPTFRR KRFFTGGTVR VPDGGDGDRL
NDIVWLHLDG RPMEDNDWTQ SDSGAGAQAL GMYLNGHGIA GRDERGGPIV DNHFLLYFNA
DGPAEVTLPP DEYADAWDVV VDTGGLVDDQ TALAAGSTCS MASRSLIVLR EHREPEAEVD
HSVAASVAQA RRG
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