| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0267 |
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| Symbol | |
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| ID | 4596151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 285767 |
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| End bp | 287506 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639774880 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_921499 |
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| Protein GI | 119714534 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.640878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACG GACCGTTCGA CGTCTGGGCG CCGCTGCCCC GCCGGTTGCG CCTGGCCGTC
GCCGGCGAGA CCGTCGCGAT GCGCCGCGGC GAGGGCGACT GGTGGACCCC CGCGGGGCCG
GTCCCTGCCG GCGCAGAGCT CGACTACGGC TACCTCGTGG ACGACGGCGA GGCACCGCGG
CCCGATCCGC GCTCGCGCCG CCAGCCGGGT GGGGTCCACC AGCTGTCGCG GACCTTCGAC
CCCGCGTCGT ACCCCTGGAC GGACCAGGCC TGGACCGGCC GCCAGCTGGC CGGCTCGGTG
GTCTACGAGC TGCACGTCGG CACGTTCACG CCCGAGGGCA CCTTCGACGC CGCGCTCGAG
AAGCTCCCTC ACCTGCGCGA GATCGGCGTC GACCTGGTCG AGCTGATGCC GGTCAACGCC
TTCAACGGCA CCCACAACTG GGGCTATGAC GGCGTCGGCT GGTTCGCCGT CCACGAGGGG
TACGGCGGGC CCGCGGGCTA CCAGCGCTTC GTCGACGGCT GCCACGCGGC CGGGCTGGGC
GTCATCCAGG ACGTGGTCTA CAACCACCTC GGTCCGTCCG GGAACTACCT GCCGGAGCTC
GGCCCGTACC TCAAGCAGGG GGCGAACACC TGGGGCGACT TCTTGAACCT CGACGGCCCG
GGCTCGGACG AGGTGCGGCG CTACATCCTC GACAACGTGC GGATGTGGCT CGCGGACTAC
CACGTCGACG GCCTGCGGCT CGATGCCGTG CACGCGCTCA ACGACGCCGG CCACCAGCAC
CTGCTCGAGG AGCTGGCGGC CGAGGTCGCG GCCCTGTCCG CCCACCAGCG GCGGCCGTTG
ACGCTGATCG CCGAGTCCGA CCTCAACGAC ACCCGGCTGG TCCGCCCGCG CGAGGCCGGC
GGCTACGGCC TGGACGCGCA GTGGAGCGAC GACTTCCACC ACGCCGTGCA CGTCGCCCTG
ACCGGCGAGA CCGCCGGCTA CTACGCCGAC TTCGAGCCGC TCTCGGCGCT GGCGAAGGTC
TGCGAGCGCG GGTTCTTCCA CGACGGCACC TGGTCGTCGT TCCGCGGCCG CGACCACGGC
TTCCCCGTCG ACCTGCGCAC GATGCCGACC TGGCGGCTGG TGGTCTGCAG CCAGAACCAC
GACCAGATCG GCAACCGCGC CCGGGGCGAC CGGATCACCG AGGTGCTCGA CGACGACCAG
CTCGCCTGCG CCGCGCTGCT GACCCTGTGC GGACCGTTCA CGCCGATGCT GTTCATGGGC
GAGGAGTGGG CGGCCTCGAC GCCGTTCCAG TTCTTCACCT CCCACCCCGA GCCCGACCTC
GGGACGGCGA CCGCCGAGGG CCGGATCGCC GAGTTCGAGC GGATGGGCTG GGACCCCGCC
GTCGTACCCG ACCCCCAGGA CCCGGCAACG TTCGAGCGCT CGAAGCTCGA CTGGGCGGAG
GCGACCCGGG GCCGGCACGC CCGGATGCTC GACGTCTACC GCCGGTTGGC GCGGCTGCGC
CGCGAGCACG AGGCGCTCAC GGACCCGTCG TTCGGCTCGG TGCGGTGCAC GGCCGACGAG
CACACCCGGG TCTTCACGAT GCGGCGCGGC GACCTGCTGG TCGCGGTGAA CTTCGGCGAC
GCCGCGGCGA CGGTGGAGAC CGCCGCCGCG ACGCTGCTGT TCCAGACCGG CGCCGGCCTC
ACGCTCGACG CCGGCCGGCT GTCGCTGCCC CCGCACGCGG GAGCCCTGGT CGGACCCTGA
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| Protein sequence | MTHGPFDVWA PLPRRLRLAV AGETVAMRRG EGDWWTPAGP VPAGAELDYG YLVDDGEAPR
PDPRSRRQPG GVHQLSRTFD PASYPWTDQA WTGRQLAGSV VYELHVGTFT PEGTFDAALE
KLPHLREIGV DLVELMPVNA FNGTHNWGYD GVGWFAVHEG YGGPAGYQRF VDGCHAAGLG
VIQDVVYNHL GPSGNYLPEL GPYLKQGANT WGDFLNLDGP GSDEVRRYIL DNVRMWLADY
HVDGLRLDAV HALNDAGHQH LLEELAAEVA ALSAHQRRPL TLIAESDLND TRLVRPREAG
GYGLDAQWSD DFHHAVHVAL TGETAGYYAD FEPLSALAKV CERGFFHDGT WSSFRGRDHG
FPVDLRTMPT WRLVVCSQNH DQIGNRARGD RITEVLDDDQ LACAALLTLC GPFTPMLFMG
EEWAASTPFQ FFTSHPEPDL GTATAEGRIA EFERMGWDPA VVPDPQDPAT FERSKLDWAE
ATRGRHARML DVYRRLARLR REHEALTDPS FGSVRCTADE HTRVFTMRRG DLLVAVNFGD
AAATVETAAA TLLFQTGAGL TLDAGRLSLP PHAGALVGP
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