| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0255 |
|---|
| Symbol | |
|---|
| ID | 4596139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 272737 |
|---|
| End bp | 274059 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639774868 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_921487 |
|---|
| Protein GI | 119714522 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCACC ATGCGGAGGT GACCGCCACC ACGCCGGCGC CGCGTTCCGC GCTGGCTGAG
CCGACGACGA AGCCGCCCGG CCGTTGGATC GCCGCGATCA CGCTGGCCAG CATCGGGCTC
TGGGCCGGCT TCTTCGGGCC GATCCAGGTG CTGCTCGCCC AGCAGGCCGA GGCGATCGCC
CCGGACGACA AGAAGGTCGT CCTCTCCGTC GTCCTCGGCC TCGGCGCCTT CGTCTCGGTG
GTCTGCAACC CGGTGTTCGG TGCCTTCTCC GACCGCACCA CCCTGAGGGC CGGCCGACGG
CTGCCCTGGA TCGCGGGGGG TGCCGTCGGC GGGGCACTGT CGCTGCTGCT CCTCTCGGTC
GCCGACAACG TCGTCGTGAT GGCGATCGGC TGGTGCGGCG TGCAGGCGAC CCTCAATGCC
ATGCTGGCTG CGGTCACCGC GACCGTGCCC GACCAGGTCC CCGTGGGCGA GCGCGGCCGG
GTCGGAGGAA TCCTCGCGGT CGCCCAGACC GTCGGCGTGG TGGGCGGAAC CGGCATCGCG
TCGGCGACCG GCAGCATCGC GGCCGGGTAC GTCGTCACCG CCGGCGTGCT GATCGTGCTG
ACGCTGCCGT ACTGCGTCGG CTCCCGCGAC GTCCCGCTGG CCCCCGACGA GCTGCCGCCG
CCGTTCGACT GGGGCGGGTT CCTGCGTTCC TTCTGGGTCT CGCCGCGCCG GCACCCGGAC
TTCGCGTGGG CCTGGATCAC CCGCTTCCTG GTCAACCTCG GCAACGCGCT CGGCCTGCTC
TACCTCCTCT ACTACCTGCA GGACGTGATC GGCGTCGACA AGGACGAGGC CGACGACCGG
GTGTTCCTGC TGACCGCGAT CTACGCGGCC GTGATCATGG CGACCACGGT CGTCTTCGGC
GTCTGGAGCG ACCGGACCGG CAAGCGCAAG GTGTTCGTGA TCTGGTCCGG CGTGGTCGGC
TCGCTCGCCT CGCTGCTGCT CGCGGTCGGC CAGACCTGGC CCGCCGCCGT GGCGGCGGCG
GTGCTGATGG GCGTCGGCTA CGGGATCTAC ACCTCGGTCG ACTTCGCCCT GATCACCCAG
GTGCTGCCCG GCGCCGAGGA CCGCGCCAAG GACCTGGGCG TCATCAACAT CGCCAACGCG
CTGCCCCAGG TGTTCGCGCC GTTCATCGCC GCCGTGATCC TGCTGGTCGT CGAGGCCGCA
GGCGGGGTGA CCGAGACCGG CGGCGACCGC TTCTCCGTCG GCTATTGCGT GCTGTACTCC
GTCGCGTTCC TGGTCGCCGT CCTCGGCTCG GTGTTCGTCA CCAAGATTCG CTCGGTTCCG
TAG
|
|---|
| Protein sequence | MLHHAEVTAT TPAPRSALAE PTTKPPGRWI AAITLASIGL WAGFFGPIQV LLAQQAEAIA
PDDKKVVLSV VLGLGAFVSV VCNPVFGAFS DRTTLRAGRR LPWIAGGAVG GALSLLLLSV
ADNVVVMAIG WCGVQATLNA MLAAVTATVP DQVPVGERGR VGGILAVAQT VGVVGGTGIA
SATGSIAAGY VVTAGVLIVL TLPYCVGSRD VPLAPDELPP PFDWGGFLRS FWVSPRRHPD
FAWAWITRFL VNLGNALGLL YLLYYLQDVI GVDKDEADDR VFLLTAIYAA VIMATTVVFG
VWSDRTGKRK VFVIWSGVVG SLASLLLAVG QTWPAAVAAA VLMGVGYGIY TSVDFALITQ
VLPGAEDRAK DLGVINIANA LPQVFAPFIA AVILLVVEAA GGVTETGGDR FSVGYCVLYS
VAFLVAVLGS VFVTKIRSVP
|
|---|
| |