Gene Noca_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0221 
Symbol 
ID4598974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp237463 
End bp238644 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content75% 
IMG OID639774834 
Productflavin reductase domain-containing protein 
Protein accessionYP_921453 
Protein GI119714488 
COG category[K] Transcription
[R] General function prediction only 
COG ID[COG1414] Transcriptional regulator
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC CGAACCCGGC CCACTTCCGG CAGGTGCTGG GCCAGTACCC CACCGGTGTC 
GCGGTGGTGA CCGCGCTCGA CGAGTCCGGT GCCCCGCTCG GGATGACGGT CGGCTCCTTC
ACCTCGGTCT CGCTCGACCC GCCGCTCGTG GCGTTCCTGC CCGACCAGGG GTCCAGCTCG
TGGCGCGCGC TGCGCGCCTC CGGCGACCGG TTCTGCGTCA ACGTCCTCGG CGCCGACCAG
GAGGACGTGT GCCGCGCGAT CGCGGTCCGC AAGGTCGACA AGTTCGCGGG CATCCCGTGG
CGGCCGTCGC CGGCCGGCAA CCCGGTGATC GACGGCGCGG TCGCGTACCT CGACTGCACG
ACCGAGCAGG TCCACGACGC CGGCGACCAC CACATCGTCG TCGGTCGGGT GCACCAGCTC
GACCTGGTCG GCGGCGACCA GCCGTTGCTG TTCTTCCGCG GCGGTTATGG CTCGTTCACC
CCGCTCTCGC TGGCCTCGGG CGACAGCGAC CTGCTCGACC ACCTGCGCCT CGTCGACCTG
GCCCGGCCGC AGATGGACCG GCTCGCGGCC CGCTTCGACA CCGAGGTCAC CGCGATCGCG
CTGGTGCGCG ACGAGCTGGT GCTGGCGGCC GCGGCCGGCC GCACCCGGCT CGCCGTCGCG
CCGACCCGGG TGGGGCAGCG GTTGCCGTTC ATGCCGCCGC TGGGCAGCTG CTTCGCCGGT
TGGGGCGACG ACGCGGTCCG CGCCGCGTGG GTGGGCGGCC TCTCGGACCT GGTCGACCCC
GACACCCGGG ACGCCGTACG CGCGGTGCCC GGACTGGTGC GTCGCCGCGG CTACTCGATC
GCACTCGGCC ACGGCGACGG TGCCCGCCTC GAGACGCTGA GCACCCGCTT CCACGAGGGC
GACGCCCAGG TCTCCAAGGC CGCCCTGCGC GAGGCGATCG CGCAGAGCGT CTCCGGCTAC
AACCCCGCGT CGTACGGCGC CGGGCCGGTC GAGCTCCGCT CGCTGAGCGC ACCGGTGTTC
GCCAACGACG GCCGGGTCGC GTTCACCCTC ACGCTCTGGG GGCCGCCCGG CGCCATCGAC
GCCGCCGAGG TCGACCGCCA CGTCGAGGAG CTGCTCGCCG CGACCGGCGC CGCGACGATC
GCCATCGACG GCCGGGTCCC CCTCGACGCC GCCATCGCCT GA
 
Protein sequence
MSDPNPAHFR QVLGQYPTGV AVVTALDESG APLGMTVGSF TSVSLDPPLV AFLPDQGSSS 
WRALRASGDR FCVNVLGADQ EDVCRAIAVR KVDKFAGIPW RPSPAGNPVI DGAVAYLDCT
TEQVHDAGDH HIVVGRVHQL DLVGGDQPLL FFRGGYGSFT PLSLASGDSD LLDHLRLVDL
ARPQMDRLAA RFDTEVTAIA LVRDELVLAA AAGRTRLAVA PTRVGQRLPF MPPLGSCFAG
WGDDAVRAAW VGGLSDLVDP DTRDAVRAVP GLVRRRGYSI ALGHGDGARL ETLSTRFHEG
DAQVSKAALR EAIAQSVSGY NPASYGAGPV ELRSLSAPVF ANDGRVAFTL TLWGPPGAID
AAEVDRHVEE LLAATGAATI AIDGRVPLDA AIA