Gene Noca_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0220 
Symbol 
ID4598973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp236745 
End bp237353 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content71% 
IMG OID639774833 
Productregulatory protein, TetR 
Protein accessionYP_921452 
Protein GI119714487 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGG CGGAGGGCCA GGACGGCTCC CGGCAGCGGA TCGTCGCCGC GGCCGCGGAG 
ATCGCGGCGG AGGCCGGCTA CGAGGGCACC ACGATCTCGA AGGTCGTCAA GCGCTCCGGC 
CTGCCGGTGA GCTCGGTCTA CTGGTTCTTC AAGGACAAGG ACGAGCTGAT CGCCGAGGTC 
GTGCGCAGCA GCTTCGACAC CTGGATCGGC GATCAGCCCA CCTGGGACCC GCTGCCCAAG 
GGCGTCTCGG TGGGCGACGG GCTGCGGGCC GTGCTCGACA AGTCGGCGCT CAGCCTGGCC 
GCCGCGCCGG ACTTCCTGCG GATCGGGCTG ATGCTGACCC TCGAGCGGCG GGAGACCGAA 
CCGGCCGCGC GCACACTGTT CCTGGACATC CGGATCGCCA TCGAGGACGA GCTGACCCGG 
TGGTTCGCCG CCGCGATCGG CACCCGCAAG GTGCGGCGCG CCCCGGACCT GCCGCGCCGG 
CTGGCCCGGA TGGTCATCGC CGGCACCGAC GGCCTGTTCC TCGCCCACCA GATCCACGAC 
GTCGCCGACA CCCACGAGTA CGTCGACATC CTCGTCACGA TCGTCGAGTC GGCGATCGCC 
GCGGCCTGA
 
Protein sequence
MTAAEGQDGS RQRIVAAAAE IAAEAGYEGT TISKVVKRSG LPVSSVYWFF KDKDELIAEV 
VRSSFDTWIG DQPTWDPLPK GVSVGDGLRA VLDKSALSLA AAPDFLRIGL MLTLERRETE 
PAARTLFLDI RIAIEDELTR WFAAAIGTRK VRRAPDLPRR LARMVIAGTD GLFLAHQIHD 
VADTHEYVDI LVTIVESAIA AA