Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0216 |
Symbol | |
ID | 4598969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 231838 |
End bp | 233535 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639774829 |
Product | ABC transporter related |
Protein accession | YP_921448 |
Protein GI | 119714483 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.167929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCTCA ACTACCTCGT CCAGGCCGTG CTCCTGGCCT CGCTCGCCCT GTCGGTGAAC CTGCTCGTGG GCTACGCCGG CCAGGTGTCG GTCGCGCACG CCGCGTTCGC CGGCGTCGGT GGCTACACGA TCGCCTACCT GACGACCGCC CGGGACTGGC CGTTCGTCAC CGCCCTGGTC GCCGCGACCC TGATCGCCGC CGCCGTCGGC GTCGTCATCG GGCTGATCGC CCTCGGCCTG GCCGAGGAGT TCCTCATCCT GATGACGCTG GCCTTCTCGC TGGCGGTGAT CGGCATCTTC GCCACCTTCG ACGCTCTCGG GGGCGTCATG GGGATCACCA ACGTCACCGG GCTCTCGATC CTCGGCCACG AGATGACCGG CCCGCGGGAC TGGCTGGTGC CCGCGCTCGG CACGCTCGTG GTCACCTTCG CCGTCTGCTG GCGGATCGGC GAGTCGCCGT ACGGCCGGGT GCTCAAGGGC ATCCGGGAGG ACTCCGACGC GACCCGGTCG CTCGGCAAGA ACACCTTCGC CTACAAGGTC GGCATCTTCG CGATCACCGC GGGCATGGCC GGCTGGGTGG GCGGCCTGTA CTCCGGGTGG CTCGGCCTCG CGACCCCCTC GGCGTTCGGC TTCCCGCTGG CCATGTCGGT CTTCGCGATG GTGATCGTCG GCGGCAGCGC CAACCTGTTC GGGTCGGTGC TCGCCGCGGG CGTGCTCACC CTCATCGAGC CGACGCTGCG CGAGGCCCTG GCGATGCAGA GCTCCCAGGC CGCGCTCGTG CAGATCGTGC TGTACGGCGC CCTCCTCGTC GTGATGATGA TCCTGCGGCC GCAGGGCCTG CTGGCCGAGC GGTTCCGGCA CGTCACGCCA CCAGCGAGCG GCCCGGTCGA GCTGGTGGCG GAGCGCGGCG CGCCGGTGGT GCGGCGCCTG GACGCGCACC CGGTCGTGCT GCGCGCCGAG GGCCTCGAGA AGCGCTTCGG CGGCATCGTG GCCGCCCGGA ACCTCAGCCT GGAGCTGCGC CGCGGGACCA TCACCGCACT GGTCGGCCCC AACGGCGCCG GCAAGACCAC GGCCTTCAAC CTGCTGACCG GGGCGATCGC CCCCGACCGG GGCAGCGTGC TGCTCGACGG CCAGGAACTG GTGGGCCGGC GACCCGACGA GATCGTGCGG GCCGGGCTGG TGCGCACCTA CCAGGACGTC CGGCTGCTGG GCCGGCTCAC CTGCCTGGAG AACGTGATGC TCGGGGTGCC CGACCAGCAC GGCGAGCACC TGGGCCGGCT GTTCGTGCCC GGCCGCGCGG TCTCCCGCGC CGACCGTGCC GTCGCCGAGC GGGCCCTGGA GTGGCTGGGG TTCGTGGGGA TGGCCGAGCA GGCCGGCGTG CCGACCGAGG CGCTGTCCTA CGGCCAGACC AAGCTGGTCT CGCTGGCCCG GGCGCTCGCG ACCGAGGCGC CGGTGCTGCT GCTCGACGAA CCGGCGTCCG GGGTCGACTC GGCCTGGGTC GAGACGATGC TCCGGATGAT CGACGCCGTG CGCGCCGAGG GCCGCACGGT CTGCCTGGTG GAGCACAACC TGGACGTGGT GCGCGAGCTC GCCGACCACA CCTACTTCAT GGAGCTCGGT GAGATCACCG CGTCCGGGAC CATCGCCGAG CTGACCAGCT CGGCCCGACT CACGGAGGCG TACTTCGGTG CCCAATGA
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Protein sequence | MWLNYLVQAV LLASLALSVN LLVGYAGQVS VAHAAFAGVG GYTIAYLTTA RDWPFVTALV AATLIAAAVG VVIGLIALGL AEEFLILMTL AFSLAVIGIF ATFDALGGVM GITNVTGLSI LGHEMTGPRD WLVPALGTLV VTFAVCWRIG ESPYGRVLKG IREDSDATRS LGKNTFAYKV GIFAITAGMA GWVGGLYSGW LGLATPSAFG FPLAMSVFAM VIVGGSANLF GSVLAAGVLT LIEPTLREAL AMQSSQAALV QIVLYGALLV VMMILRPQGL LAERFRHVTP PASGPVELVA ERGAPVVRRL DAHPVVLRAE GLEKRFGGIV AARNLSLELR RGTITALVGP NGAGKTTAFN LLTGAIAPDR GSVLLDGQEL VGRRPDEIVR AGLVRTYQDV RLLGRLTCLE NVMLGVPDQH GEHLGRLFVP GRAVSRADRA VAERALEWLG FVGMAEQAGV PTEALSYGQT KLVSLARALA TEAPVLLLDE PASGVDSAWV ETMLRMIDAV RAEGRTVCLV EHNLDVVREL ADHTYFMELG EITASGTIAE LTSSARLTEA YFGAQ
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