Gene Noca_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0216 
Symbol 
ID4598969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp231838 
End bp233535 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content72% 
IMG OID639774829 
ProductABC transporter related 
Protein accessionYP_921448 
Protein GI119714483 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.167929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCTCA ACTACCTCGT CCAGGCCGTG CTCCTGGCCT CGCTCGCCCT GTCGGTGAAC 
CTGCTCGTGG GCTACGCCGG CCAGGTGTCG GTCGCGCACG CCGCGTTCGC CGGCGTCGGT
GGCTACACGA TCGCCTACCT GACGACCGCC CGGGACTGGC CGTTCGTCAC CGCCCTGGTC
GCCGCGACCC TGATCGCCGC CGCCGTCGGC GTCGTCATCG GGCTGATCGC CCTCGGCCTG
GCCGAGGAGT TCCTCATCCT GATGACGCTG GCCTTCTCGC TGGCGGTGAT CGGCATCTTC
GCCACCTTCG ACGCTCTCGG GGGCGTCATG GGGATCACCA ACGTCACCGG GCTCTCGATC
CTCGGCCACG AGATGACCGG CCCGCGGGAC TGGCTGGTGC CCGCGCTCGG CACGCTCGTG
GTCACCTTCG CCGTCTGCTG GCGGATCGGC GAGTCGCCGT ACGGCCGGGT GCTCAAGGGC
ATCCGGGAGG ACTCCGACGC GACCCGGTCG CTCGGCAAGA ACACCTTCGC CTACAAGGTC
GGCATCTTCG CGATCACCGC GGGCATGGCC GGCTGGGTGG GCGGCCTGTA CTCCGGGTGG
CTCGGCCTCG CGACCCCCTC GGCGTTCGGC TTCCCGCTGG CCATGTCGGT CTTCGCGATG
GTGATCGTCG GCGGCAGCGC CAACCTGTTC GGGTCGGTGC TCGCCGCGGG CGTGCTCACC
CTCATCGAGC CGACGCTGCG CGAGGCCCTG GCGATGCAGA GCTCCCAGGC CGCGCTCGTG
CAGATCGTGC TGTACGGCGC CCTCCTCGTC GTGATGATGA TCCTGCGGCC GCAGGGCCTG
CTGGCCGAGC GGTTCCGGCA CGTCACGCCA CCAGCGAGCG GCCCGGTCGA GCTGGTGGCG
GAGCGCGGCG CGCCGGTGGT GCGGCGCCTG GACGCGCACC CGGTCGTGCT GCGCGCCGAG
GGCCTCGAGA AGCGCTTCGG CGGCATCGTG GCCGCCCGGA ACCTCAGCCT GGAGCTGCGC
CGCGGGACCA TCACCGCACT GGTCGGCCCC AACGGCGCCG GCAAGACCAC GGCCTTCAAC
CTGCTGACCG GGGCGATCGC CCCCGACCGG GGCAGCGTGC TGCTCGACGG CCAGGAACTG
GTGGGCCGGC GACCCGACGA GATCGTGCGG GCCGGGCTGG TGCGCACCTA CCAGGACGTC
CGGCTGCTGG GCCGGCTCAC CTGCCTGGAG AACGTGATGC TCGGGGTGCC CGACCAGCAC
GGCGAGCACC TGGGCCGGCT GTTCGTGCCC GGCCGCGCGG TCTCCCGCGC CGACCGTGCC
GTCGCCGAGC GGGCCCTGGA GTGGCTGGGG TTCGTGGGGA TGGCCGAGCA GGCCGGCGTG
CCGACCGAGG CGCTGTCCTA CGGCCAGACC AAGCTGGTCT CGCTGGCCCG GGCGCTCGCG
ACCGAGGCGC CGGTGCTGCT GCTCGACGAA CCGGCGTCCG GGGTCGACTC GGCCTGGGTC
GAGACGATGC TCCGGATGAT CGACGCCGTG CGCGCCGAGG GCCGCACGGT CTGCCTGGTG
GAGCACAACC TGGACGTGGT GCGCGAGCTC GCCGACCACA CCTACTTCAT GGAGCTCGGT
GAGATCACCG CGTCCGGGAC CATCGCCGAG CTGACCAGCT CGGCCCGACT CACGGAGGCG
TACTTCGGTG CCCAATGA
 
Protein sequence
MWLNYLVQAV LLASLALSVN LLVGYAGQVS VAHAAFAGVG GYTIAYLTTA RDWPFVTALV 
AATLIAAAVG VVIGLIALGL AEEFLILMTL AFSLAVIGIF ATFDALGGVM GITNVTGLSI
LGHEMTGPRD WLVPALGTLV VTFAVCWRIG ESPYGRVLKG IREDSDATRS LGKNTFAYKV
GIFAITAGMA GWVGGLYSGW LGLATPSAFG FPLAMSVFAM VIVGGSANLF GSVLAAGVLT
LIEPTLREAL AMQSSQAALV QIVLYGALLV VMMILRPQGL LAERFRHVTP PASGPVELVA
ERGAPVVRRL DAHPVVLRAE GLEKRFGGIV AARNLSLELR RGTITALVGP NGAGKTTAFN
LLTGAIAPDR GSVLLDGQEL VGRRPDEIVR AGLVRTYQDV RLLGRLTCLE NVMLGVPDQH
GEHLGRLFVP GRAVSRADRA VAERALEWLG FVGMAEQAGV PTEALSYGQT KLVSLARALA
TEAPVLLLDE PASGVDSAWV ETMLRMIDAV RAEGRTVCLV EHNLDVVREL ADHTYFMELG
EITASGTIAE LTSSARLTEA YFGAQ