Gene Noca_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0215 
Symbol 
ID4598968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp231042 
End bp231788 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID639774828 
ProductABC transporter related 
Protein accessionYP_921447 
Protein GI119714482 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.871033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATC ACCAGGCCGG CGACGTGCGG ACGATCGCCG AGCCGCCGCT GCTGCGGGTG 
CGCGACCTGG CGGCGGCGTA CGGCCCCAAG CAGGTGCTGT ACGGCGTCGA CCTGGAGGTC
CGTGCCGGCG AGATCGTGGC GCTGATGGGC CACAACGGCG CGGGCAAGAC CACGACCATC
CGCACCGTGC TCGGCGCGCT GCGGGCCCGC TCGGGCGAGG TCTCGGTCGC CGGGGAGGAC
TTGACCGGGC AGCCGGTCCG CCGTCTGGTC CGCGCCGGTG TCGCGCTGGT CCCCTCGGAG
CGCTTCGTGT TCCCCGACCT CTCGATCCGC GACAACCTGC TGCTCGGTGC GGCCAACGCA
CCCCGGGACG CCGACTCCGC CGCGCGGCTG CGCGAGGTCG AGGAGGCGTT CCCGCTCCTG
TCCGAGCGCA GCTCGCAGCT GGCCGGCCAG CTCTCCGGCG GCCAGCAGCG GATGGTCAGC
CTCGGCATCG CGCTGATGGC CCAGCCCCGG CTGCTGCTGC TCGACGAGCC CTCGCTCGGC
CTCGCGCCGT CGATCGTGGA GGCGATCTTC GGCCGGCTGC GCGCGCTGGC CACGTCGTCG
GGACTCGGCA TCCTGCTGCT GGAGCAGAAC GTCAAGCAGG CGCTGCAGAT CGCGGACCGC
GCCTACGTGA TGCGCTCGGG CCGGGTGATC CTCGAGGAGC CCGCCGCCCA GATGCGGCGG
CGTCCGGACT TCTGGGACCT GTTCTGA
 
Protein sequence
MTDHQAGDVR TIAEPPLLRV RDLAAAYGPK QVLYGVDLEV RAGEIVALMG HNGAGKTTTI 
RTVLGALRAR SGEVSVAGED LTGQPVRRLV RAGVALVPSE RFVFPDLSIR DNLLLGAANA
PRDADSAARL REVEEAFPLL SERSSQLAGQ LSGGQQRMVS LGIALMAQPR LLLLDEPSLG
LAPSIVEAIF GRLRALATSS GLGILLLEQN VKQALQIADR AYVMRSGRVI LEEPAAQMRR
RPDFWDLF