Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0215 |
Symbol | |
ID | 4598968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 231042 |
End bp | 231788 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639774828 |
Product | ABC transporter related |
Protein accession | YP_921447 |
Protein GI | 119714482 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.871033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGATC ACCAGGCCGG CGACGTGCGG ACGATCGCCG AGCCGCCGCT GCTGCGGGTG CGCGACCTGG CGGCGGCGTA CGGCCCCAAG CAGGTGCTGT ACGGCGTCGA CCTGGAGGTC CGTGCCGGCG AGATCGTGGC GCTGATGGGC CACAACGGCG CGGGCAAGAC CACGACCATC CGCACCGTGC TCGGCGCGCT GCGGGCCCGC TCGGGCGAGG TCTCGGTCGC CGGGGAGGAC TTGACCGGGC AGCCGGTCCG CCGTCTGGTC CGCGCCGGTG TCGCGCTGGT CCCCTCGGAG CGCTTCGTGT TCCCCGACCT CTCGATCCGC GACAACCTGC TGCTCGGTGC GGCCAACGCA CCCCGGGACG CCGACTCCGC CGCGCGGCTG CGCGAGGTCG AGGAGGCGTT CCCGCTCCTG TCCGAGCGCA GCTCGCAGCT GGCCGGCCAG CTCTCCGGCG GCCAGCAGCG GATGGTCAGC CTCGGCATCG CGCTGATGGC CCAGCCCCGG CTGCTGCTGC TCGACGAGCC CTCGCTCGGC CTCGCGCCGT CGATCGTGGA GGCGATCTTC GGCCGGCTGC GCGCGCTGGC CACGTCGTCG GGACTCGGCA TCCTGCTGCT GGAGCAGAAC GTCAAGCAGG CGCTGCAGAT CGCGGACCGC GCCTACGTGA TGCGCTCGGG CCGGGTGATC CTCGAGGAGC CCGCCGCCCA GATGCGGCGG CGTCCGGACT TCTGGGACCT GTTCTGA
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Protein sequence | MTDHQAGDVR TIAEPPLLRV RDLAAAYGPK QVLYGVDLEV RAGEIVALMG HNGAGKTTTI RTVLGALRAR SGEVSVAGED LTGQPVRRLV RAGVALVPSE RFVFPDLSIR DNLLLGAANA PRDADSAARL REVEEAFPLL SERSSQLAGQ LSGGQQRMVS LGIALMAQPR LLLLDEPSLG LAPSIVEAIF GRLRALATSS GLGILLLEQN VKQALQIADR AYVMRSGRVI LEEPAAQMRR RPDFWDLF
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