Gene Noca_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0203 
Symbol 
ID4598956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp217732 
End bp219144 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content74% 
IMG OID639774816 
Productfumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 
Protein accessionYP_921435 
Protein GI119714470 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01813] flavocytochrome c 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCCCG GCCTGCCGAT CGAGGGCGAG CTGCCCGACC GGGTCGGTGT ACTCGTGCTC 
GGCAGCGGGC TCGCCGGGTG CGCCGCCCTG CTCGCCGCGG CTGAGGCCGG TCAGTACGCC
GTGCTCCTGG AGAAGACCGG CGCCATCGGC GGCAGCACGG TCCGCTCCGC CGGGCTCTCC
GCGTTCGCGG GCACTCCGGA GCAGGTGGCC CAGGGGATCG GCGACTCGGT GGAGCTGCTC
AAGAAGGACC TGATGGAGAC CGGGCGGCAC GTCTGCGACG AGGCGCTGGT CGACCTGTAC
TGCGCGCACC AGCTCGAGAC CTACGAGTGG CTGACCGGGC ACGGCGTCCG GTACGGCGAG
GTGCACGCCG CGTCCGGCCA GTCGGTCCCG CGCTCGCACC CCACCGACAC CACCGGGATG
CTGGTCACCC TGCTCAAGGC GGCCGGCCGG CTGGGTGCCC GGATCCTCCT CGACACGGCC
GCCGAGCGGC TGGTCCGCGA GGGCGGCCAA GTGATCGGCG TCGACGTGCG CACCGCGGAC
GGCAGCCGCC GGCGGATCCT CGCCGACGCG GTCGTGCTCG CCACCGGCGG CTTCGCGCGC
AGCCCGGAGC TGCTCACCCG GTTCGCGCCG CAGATGGCGA ACGCGCTCAC CGCGGGCGGC
GACGGGTGCA CCGGCGACGG CCTGCTGATG GGCTGGCAGC TCGGGGCGGG GGTCGTGGAC
ACGCCGTACG TCAAGGGGAC CTACGGGATC TTCCACGAGG CCCACCCCGA CGAGGACGGC
ACCGGCATCC TCGCGGTCTA CAAGGGCGCG ATCGCGGTCA ACCGCGAGGG ACGCCGCTTC
GTCGACGAGT CCCTGCCCTA CAAGGAGATC GGCGACGCGG CCCTGGCCCA GCCGGGCGTC
ACGACCTGGC AGGTCTTCGA CGCCGGCGTG ATGGCCCAGA GCAACGACGA GGTGCCGATC
TACGAGTTCG CGGGCCGCGA CCGGGCCGGC ATGCTGCTCA AGGCCGACAC GGTCGAGGGG
CTCGAGGCGC TGGTGGGCCT CCCGGACGGC TCACTCGTCG CGACCGTCGC CGACTACAAC
GCCCGGATCG CCGATGGCCG GCCCGACCCG CTGGGCCGCG CCCACCTCTC CGGCGGCGTG
GATACGCCGA CCCCGCTCGA CCGGCCCCCG TTCTACGCCC ACCCGTCGCG GACCGTCGTG
CTCGCGACGT ACTGCGGCCT CACGGTGGAC ACCCGGCTGC GCGTGCTCGA CGTGTTCGGG
GAGCCGATCG AGCGCCTCTA CGCCGCGGGC GAGGTGATCG GCGGGTTCCA CGGCGGCGGC
TACATGACCG GCACGTCGAT CGGCAAGGCC GGCATCTTCG GCCGCCTGGC CGGGCAGCAC
GCCGCGGCCG AGGAGAGCGA GCTGACATGG TGA
 
Protein sequence
MIPGLPIEGE LPDRVGVLVL GSGLAGCAAL LAAAEAGQYA VLLEKTGAIG GSTVRSAGLS 
AFAGTPEQVA QGIGDSVELL KKDLMETGRH VCDEALVDLY CAHQLETYEW LTGHGVRYGE
VHAASGQSVP RSHPTDTTGM LVTLLKAAGR LGARILLDTA AERLVREGGQ VIGVDVRTAD
GSRRRILADA VVLATGGFAR SPELLTRFAP QMANALTAGG DGCTGDGLLM GWQLGAGVVD
TPYVKGTYGI FHEAHPDEDG TGILAVYKGA IAVNREGRRF VDESLPYKEI GDAALAQPGV
TTWQVFDAGV MAQSNDEVPI YEFAGRDRAG MLLKADTVEG LEALVGLPDG SLVATVADYN
ARIADGRPDP LGRAHLSGGV DTPTPLDRPP FYAHPSRTVV LATYCGLTVD TRLRVLDVFG
EPIERLYAAG EVIGGFHGGG YMTGTSIGKA GIFGRLAGQH AAAEESELTW