Gene Noca_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0190 
Symbol 
ID4599007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp200387 
End bp202231 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content69% 
IMG OID639774802 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_921422 
Protein GI119714457 
COG category[C] Energy production and conversion 
COG ID[COG1274] Phosphoenolpyruvate carboxykinase (GTP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG ACACACAGGC TCCGATCAGC ACGCCCACGT CCGACCTGTC GGGTCGGCCG 
AGCACCCATC CGGGCATCCT CGAGTTCGTC TCCGAGGTCG CCGCCCTGAC CCAACCGGAC
CGGATCCACT GGTGCACCGG CTCGGACGAG GAGTGGACCG TCCTCACCGA CGCCCTGGTG
TCGACCGGGA CCTTCACCCC CCTGAACCCG GATCTCAAGC CGAACTCCTT CCACGCCGCC
TCCGACCCGA TGGACGTCGC GCGCGTCGAG GGCCGCACCT TCATCTGCTC GGTCGACGAG
CGGGACGCGG GGCCCACCAA CAACTGGATG GACCCGCAGG AGATGAAGGC GATCATGCGC
GACCTCTACG CCGGCTGCAT GCGCGGCCGG ACGATGTACG TGATCCCGTT CGTCATGGGC
CACCTGGACG CCGAGCAGCC GATGTTCGGC ATCGAGATCA CCGACTCCGC CTACGTCACC
GCCTCGATGC GGGTGATGGC CCGGATGGGC AGCAACGTGC TGGAGCGGAT GGAGGAGCTC
GAGGCCGAGT TCGTGCCGGC GCTGCACTCG GTCGGCCACC CGCTCGAGCC GGGCGAGGCG
GACGTCGTGT GGCCGTGCAA CGACACCAAG TACATCGTGC AGTTCCCCGA GGAGCATGCG
ATCTGGTCCT ACGGCTCCGG CTACGGCGGC AACGCGCTGC TGGGCAAGAA GTGCTATGCG
CTGCGCATCG CGAGCGTGAT GGCCCGCGAC GAGGGCTGGC TCGCCGAGCA CATGCTGATC
CTCAAGCTCA CCTCGCCGCA GGGCGTCGTG AAGTACGTCG CCGCCGCGTT CCCGAGCGCC
TGCGGCAAGA CGAACCTCGC GATGCTCCGG CCGACGATCC CCGGCTGGAA GGTCGAGACC
CTCGGCGACG ACATCGCCTG GATGCGCGTC GGCGAGGACG GCCGGTTGTG GGCGGTCAAC
CCGGAGTATG GCTTCTTCGG GGTCGCGCCC GGCACCAACG AGCACACCAA CCCCAACGCG
ATGACGACCA TCAACAAGGG CAACTCGGTG TTCACCAACG TCGCGCTGAC CGAGGACGGC
GACGTCTGGT GGGAGGGTCT GGAGAACCCG CCGGCCCGCG CCACGTCCTG GACGGGCCAG
CCCTGGACCC CGGAGTCCGA GGAGCCGTCC AGCCACCCCA ACAGCCGCTA CTGCACCCCG
ATCAAGCAGT GCGACATCCT CGCCGCGGAG TACGACGACC CGCGCGGCGT ACCGATCGAC
GCGATCCTGT TCGGTGGGCG CCGCGAGACC ACCGTGCCGC TGGTCTTCGA GGCCCGGGAC
TGGACGCACG GGACCTTCCT CGGCGCCACG CTCTCCTCCG AGACGACGGC GGCGGCCGTC
GGCGCGGTGG GCGTGGTGCG CCGCGACCCG ATGGCGATGC TGCCGTTCAT CGGCTACAAC
GCCGGCGACT ACTTCAACCA CTGGATCACG GTCGGGAAGG ACAACGACGA GGCCTTGCTC
CCGCGGATCT TCTACGTGAA CTGGTTCCGT CGCGACGCTG ACGGCGGCTT CCTATGGCCG
GGCTTCGGCG AGAACAGCCG GGTCCTGAAG TGGGTCGTCG AGCGGATCGA CGGCCAGGCG
GCCGCCGTGG AGACCCCGAT CGGCTACGTC CCGACGCCGG AGTCCCTCGA CACCGATGGC
CTCGACCTCT CAGCCGAGGA CCTGGCCGCG GCGCTCGCCG TCGACCCGGA GGAGTGGAGG
GCGGAGGTCC CGCAGATCCA GGAGTGGTTC GAGAAGTTCG GCGAGGACCT CCCGGCCGTG
CTCTGGACCG AGCTGGACGG CCTGCGCGCT CGCCTCGGCT CCTGA
 
Protein sequence
MTADTQAPIS TPTSDLSGRP STHPGILEFV SEVAALTQPD RIHWCTGSDE EWTVLTDALV 
STGTFTPLNP DLKPNSFHAA SDPMDVARVE GRTFICSVDE RDAGPTNNWM DPQEMKAIMR
DLYAGCMRGR TMYVIPFVMG HLDAEQPMFG IEITDSAYVT ASMRVMARMG SNVLERMEEL
EAEFVPALHS VGHPLEPGEA DVVWPCNDTK YIVQFPEEHA IWSYGSGYGG NALLGKKCYA
LRIASVMARD EGWLAEHMLI LKLTSPQGVV KYVAAAFPSA CGKTNLAMLR PTIPGWKVET
LGDDIAWMRV GEDGRLWAVN PEYGFFGVAP GTNEHTNPNA MTTINKGNSV FTNVALTEDG
DVWWEGLENP PARATSWTGQ PWTPESEEPS SHPNSRYCTP IKQCDILAAE YDDPRGVPID
AILFGGRRET TVPLVFEARD WTHGTFLGAT LSSETTAAAV GAVGVVRRDP MAMLPFIGYN
AGDYFNHWIT VGKDNDEALL PRIFYVNWFR RDADGGFLWP GFGENSRVLK WVVERIDGQA
AAVETPIGYV PTPESLDTDG LDLSAEDLAA ALAVDPEEWR AEVPQIQEWF EKFGEDLPAV
LWTELDGLRA RLGS