Gene Noca_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0168 
Symbol 
ID4598944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp181745 
End bp182926 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content76% 
IMG OID639774778 
Producthypothetical protein 
Protein accessionYP_921400 
Protein GI119714435 
COG category[S] Function unknown 
COG ID[COG1641] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00299] conserved hypothetical protein TIGR00299 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACGG CCTGGGTCGA CGCCTCCGCC GGGGCGAGCG GCGACATGCT GCTCGGGGCC 
CTGGTCGGCG CCGGGGTGCC GGTCGCGGTC CTCCAGGCCG CGGTCGACGC CGTCGCCCCC
GAGCCGGTGA CGTTGCGGGT CGAGCACGTC CGCCGGGGCG GGCTGGCCGC GACCCGCTGC
CACGTGGAGG TGACCGACAC CGCGCGGCAC CGAACCTGGC GTGACGTGCG CACGCTGCTC
GCCGCCGCCG ACCTGGCCGA CGACGTCCGC GGCCTGGCGC TGCGGGTCTT CGAGCGGCTC
GCGACCGCCG AGGCGACCGT GCACGGCACC AGCCCCGACG ACGTGCACTT CCACGAGGTC
GGGGCCCTGG ACGCGATCGC GGACGTCACC GGGGTCGTCG CCGGCTTCGT CCACCTGGGC
GCCACCGCCG TGACCGTGTC CCCGGTCGCG GTCGGGTCCG GCTCGGTGTC GACCGCCCAC
GGCCTGCTGC CGGTGCCGCC GCCCGCCGTG GCCGAGCTCC TGCGCGGGGT CCCGTCGTAC
GCCGGTGCCG CGACCATGGA GACGTGCACC CCGACCGGGG CGGCCCTGCT GACGACGCTG
GCGACGGCGT ACGGCCCGCA GCCGGCGATG TCGGTCGACA CCATCGGCGT GGGTGCCGGC
GGGCGCGATC CCGAGGGCCA CCCCAACGTG CTGCGCCTGT TCGTCGGCGT CCCCGCAGAC
GCCGGCGGCG GCCCGCTGCT GCTGGAGTGC AACGTCGACG ACCTCGACCC CCGGGTCTGG
CCCGCGGTCA TCGCGGCGCT GCTCGAGGCG GGTGCCTCGG ACGCGTGGCT GACGCCGATC
CTGATGAAGA AGGGCCGGCC GGCGCACACG CTGAGCGCCC TGGTCGACGC CGGTCGGGCG
GCCGGCGTGC GGGCCGCGAT CTTCCGGCAG ACCTCGACGA TCGGGCTGCG CGAGCAGCCG
CTGACCAAGC ACGCGCTGGA GCGTGAGATC GTCGCCGTCG ACGTCGACGG GCAGCGGATC
GCGGTCAAGC TGGCCCGCCA TGACGGGGCC GTCGTCAACG CCCAGCCGGA GTACGACGAC
GTGGCGCGCG CGGCGGCCGA CCTGGATCGC CCGGTCGCCG ACGTCCTCGC CGAGGCCGTC
GCCCGCGGCC GCGCCTTCCT CACCCCTGGA GACAAGATCT GA
 
Protein sequence
MTTAWVDASA GASGDMLLGA LVGAGVPVAV LQAAVDAVAP EPVTLRVEHV RRGGLAATRC 
HVEVTDTARH RTWRDVRTLL AAADLADDVR GLALRVFERL ATAEATVHGT SPDDVHFHEV
GALDAIADVT GVVAGFVHLG ATAVTVSPVA VGSGSVSTAH GLLPVPPPAV AELLRGVPSY
AGAATMETCT PTGAALLTTL ATAYGPQPAM SVDTIGVGAG GRDPEGHPNV LRLFVGVPAD
AGGGPLLLEC NVDDLDPRVW PAVIAALLEA GASDAWLTPI LMKKGRPAHT LSALVDAGRA
AGVRAAIFRQ TSTIGLREQP LTKHALEREI VAVDVDGQRI AVKLARHDGA VVNAQPEYDD
VARAAADLDR PVADVLAEAV ARGRAFLTPG DKI