| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0157 |
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| Symbol | |
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| ID | 4598933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 172231 |
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| End bp | 173097 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639774767 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_921389 |
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| Protein GI | 119714424 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGAGC TGCCCGAGGT GGAAGCCCTG GCCCTCGACC TGCGGGGCCG GCTGGACGGC
CATGCCATCG CGAAGATCCA CGTCGCCGCG TTCAGCGCGC TCAAGACCTT CGACCCGCCG
CTGTCCGCGC TCGAGGGGAC CCTCGTCGAC GACGTGACCC GGCACGGGAA GTTCCTCGAC
ATCGAGGCCT CCGGCCTGCA CCTGGTGCTG CACCTGGCGC GCGCCGGGTG GGTCCGTTGG
CGCGACGAGG TCCCCACGAT CCCGCCCAAG CCGAGCACGA AGTCCACCCT CGCGGTCCGC
ATCGTCCTCG ACGACCAGTC CGGGCTCGAC GTCACCGAGG CCGGCACCCG CAAGAGCCTG
GCGATGTACG TCGTCCGTGA CCCGCACGAC GTCCCCGGCA TCGCCAGCCT CGGGCCGGAC
CCGCTGACCG ACGAGTTCAC CATCGACCGG CTGCGCGAGA TCCTCGAGCG CGAGGGCCGC
AAGCAGCTCA AGGGCGTGCT GCGCCACCAG GGCACCATCG CCGGCATCGG CAACGCCTAC
TCCGACGAGA TCCTGCACGC CGCCCGGATG TCGCCGTTCA AGGCGGCGGG CACGCTCACC
GACGACGAGC TGCAGGTCCT GTACGACGCC CTCCGCGGCA CCCTCGGCGA CGCGGTCGGG
CGCTCCCGCG GGCTGGCGGC GAGCGAGCTG AAGGGCGAGA AGAAGTCCCA CCTCGCGGTG
CACGGGCGCG CCGGGCAGGC CTGCCCGGTG TGCGGCGACA CGGTCCGCGA GGTGTCCTTC
GCCGACTCCA GCCTGCAGTA CTGCCCGACC TGCCAGACCG GCGGCAAGCC GCTCGCCGAC
CGACGGCTCA GCAAGCTGCT GAAGTAG
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| Protein sequence | MPELPEVEAL ALDLRGRLDG HAIAKIHVAA FSALKTFDPP LSALEGTLVD DVTRHGKFLD
IEASGLHLVL HLARAGWVRW RDEVPTIPPK PSTKSTLAVR IVLDDQSGLD VTEAGTRKSL
AMYVVRDPHD VPGIASLGPD PLTDEFTIDR LREILEREGR KQLKGVLRHQ GTIAGIGNAY
SDEILHAARM SPFKAAGTLT DDELQVLYDA LRGTLGDAVG RSRGLAASEL KGEKKSHLAV
HGRAGQACPV CGDTVREVSF ADSSLQYCPT CQTGGKPLAD RRLSKLLK
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