Gene Noca_0148 details

Gene Information

• Locus tag: Noca_0148
• ID: 4597597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 163348
• End bp: 165252
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639774758
• Product: carbamoyl-phosphate synthase L chain, ATP-binding
• Protein accession: YP_921380
• Protein GI: 119714415
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAATT CCCTCGCAGC AGTCCTGGAG TCCGTGCTCG TCGCCAACCG CGGCGAGATC 
GCGCTGCGCG TCATGCGCGC CTGCCGGAAG TACGGCGTGC GGACGATCGC GATCTACACC 
GACCTCGACG TCGACGCGCC GCACGTCCGG GCCGCGGACG ATGCCGTGCA CGTCTCGAGC 
TACCTGGACA TCGACGCGGT CGTCGCCGCC GCCGTTGCGA GCGGGGCCAC CGCGGTGCAC 
CCCGGCTACG GCTTCCTCTC GGAACGGTCC GCGTTCGTTC GTGCGGTCGA GGCCGCCGGT 
GTCGTCTTCG TCGGACCGCC CGCCGACGTC ATGGACAAGA TGGGCCGCAA GGACGCCGCC 
CGCGAGATCG CGGTCGCGGC CGGCGTGCCG GTCGTGCCGC GGGGCGAGGA CGCGGGCTTT 
CCCGTCCTGG TGAAGGCCGC CGCCGGAGGC GGCGGCAAGG GCATGCGCGT CGTTCGTGAG 
GAGGCCGACC TCGAGGAGGC CAAGGCCGCC GCGGCCCGCG AGGCGCTCGC CGCGTTCGGC 
GACGACACCC TCCTGATCGA GAAGTACGTC GAGCGCGGCC GGCACATCGA GGTCCAGATC 
ATGGCCGACG CGCACGGCCA CGTGGTCCAC CTCGACGAGC GGGACTGCTC CACCCAGCGC 
CGGCACCAGA AGGTGCTCGA GGAGGCGCCC GCGCCGACCA TCAGCCCCGA GGTCCGCGAG 
CTGGTCACCA GCAGCGCCGT GGCTCTGGCC AAGCAGGTGG GCTACGTGAA CGCCGGCACC 
GTCGAGTTCC TCGTCGACGA CGACACGGGT GAGGCGTACT TCCTGGAGAT GAACACCCGG 
CTCCAGGTCG AGCACCCCGT CACCGAGCTG ATCCACCACG ACCTGGACCT CGTCCTCCAC 
CAGCTCCTCG TCGCGCTCGG GCACCCCCTG GAGATCGAGC AGGACAACGT CCGGCCGTCC 
GGGCACGCGA TCGAGGCGCG GGTGTACGCC GAGGACTCCT TCGGCGGCTT CCTGCCCCAG 
GCCGGGCGCA CGTCGATCGT GCGCTGGCCG GCCGGGGTCC GCGTGGACCA CGCGCTCGAG 
CCCGACCAGG TCGTCAGCAC GTCGTACGAC CCGATGCTTG GCAAGGTCAT CGTGCACGGC 
CCCGACCGAG AGTCCGCGCG CCGCGCCCTG GTCGACGCGC TGGACCGGAC CGCGATCCTC 
GGGCTCACGA CCAACGTCGG GTTCCTGCGC GCGCTGGTGG CGAGCGAGGA GTTCCGCGAC 
GCCGCCATCG ACACCGCCTG GCTGGACCGC AACAGCGTCC CGGCGCCCGA CGACGACCTG 
CCGCGGGTCT TCGTCGCCTG GGTGAGCGCG ATGCTTGCCG CCGGGCACGA CAGCGGGCAG 
CCGTTCCGGG CCGATGGCTG GCGCTCCGGC GCCGACCCCG CGCCGACCAT CGTCGAGCTC 
GACCGGCCGG TCGTGGTCGA CCGGTTCGCG GGCCTGGTCG ACGGCCGTGC GGTGCGGCAG 
GTCGCGGCCG CCGATCACGT CCTCACCCTC GAGGTCGACG GGCGCGTGCA CTCGGCGGTC 
GTCAACGTGC AGCCACACGT CGCCGAGGTC GTCCACCACG GCCAGCGCTT CGTGTTCGAG 
CGGCCCGACG TGTTCGGTGA CCACGCGGTC GACGTCGGCG ACGGGGCGAT CGCCGCACCG 
ATGCCGGGTA CCGTCTTGGA CGTCCGCGTC GAGCCCGGCG CGACCGTCGT CGCCGGCGAC 
GTGCTCGGCG TCCTGGAGGC GATGAAGATG GAGCTGACCC TCAAGGCGCC CTTCGACGGC 
ACGGTCAGCC AGGTCGGGGC CACCATCGGC GCCCAGGTCG CGCTCGGCGC CCGGCTGTTC 
GTGGTCGAGC CGCACGCCGA GGCCGAGGAA GAGGAGGCCG GCTGA 

 

Protein sequence

MTNSLAAVLE SVLVANRGEI ALRVMRACRK YGVRTIAIYT DLDVDAPHVR AADDAVHVSS 
YLDIDAVVAA AVASGATAVH PGYGFLSERS AFVRAVEAAG VVFVGPPADV MDKMGRKDAA 
REIAVAAGVP VVPRGEDAGF PVLVKAAAGG GGKGMRVVRE EADLEEAKAA AAREALAAFG 
DDTLLIEKYV ERGRHIEVQI MADAHGHVVH LDERDCSTQR RHQKVLEEAP APTISPEVRE 
LVTSSAVALA KQVGYVNAGT VEFLVDDDTG EAYFLEMNTR LQVEHPVTEL IHHDLDLVLH 
QLLVALGHPL EIEQDNVRPS GHAIEARVYA EDSFGGFLPQ AGRTSIVRWP AGVRVDHALE 
PDQVVSTSYD PMLGKVIVHG PDRESARRAL VDALDRTAIL GLTTNVGFLR ALVASEEFRD 
AAIDTAWLDR NSVPAPDDDL PRVFVAWVSA MLAAGHDSGQ PFRADGWRSG ADPAPTIVEL 
DRPVVVDRFA GLVDGRAVRQ VAAADHVLTL EVDGRVHSAV VNVQPHVAEV VHHGQRFVFE 
RPDVFGDHAV DVGDGAIAAP MPGTVLDVRV EPGATVVAGD VLGVLEAMKM ELTLKAPFDG 
TVSQVGATIG AQVALGARLF VVEPHAEAEE EEAG