Gene Noca_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0123 
Symbol 
ID4597572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp136857 
End bp137420 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content74% 
IMG OID639774733 
Productregulatory protein, TetR 
Protein accessionYP_921355 
Protein GI119714390 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.156619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGGGA CCACGCGCTC GCGGATCGTG GACGCGGCGG TCGCCATGAC CGTCGAGTCC 
GGCTGGGCAC GGGTCACGAT GGGCGCCCTC GCCGAGCGGG TGGGGGTCAG CCGGCAGACC 
GTCTACAACG AGGTCGGCAC CAAGCCCGGG CTGGCCGAGG CGATGATCCA CCAGGAGCTG 
GACCGCTTCC TCGGCGTCGT CTCGGAGGCC TTCGACCGGC ACCCGGACGA CCTGGTCGAC 
GCGATCCGCG CCGCCTCCTC GGGCGTGCTC GAGCTGGCCC AGGACAACAG GCTGCTGCAC 
GCGGTCGTCT CCGCGACGCA CGGCGCGGAC ACCGAGCTGC TGCCGCTGCT GACCACGCAT 
GCCGAGTCGC TGCTGGCGGC CGCGAAGCTG GTCGTCGCGG ACCGGCTTGC GCCGTACTCC 
CTCGGGATCG AGGGCCGGCG CCTGGCGGCG GCCATCGACG TGGTGGTCCG GGTCGTGCTC 
AGCCACGTGA TGCAGCCCTC CGGGTCCCCG GCCGACACCG CCGACGACAT CGCCTGGATC 
GCCGCCCGGG TGCTGCGCGG GTAG
 
Protein sequence
MPGTTRSRIV DAAVAMTVES GWARVTMGAL AERVGVSRQT VYNEVGTKPG LAEAMIHQEL 
DRFLGVVSEA FDRHPDDLVD AIRAASSGVL ELAQDNRLLH AVVSATHGAD TELLPLLTTH 
AESLLAAAKL VVADRLAPYS LGIEGRRLAA AIDVVVRVVL SHVMQPSGSP ADTADDIAWI 
AARVLRG