| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0115 |
|---|
| Symbol | |
|---|
| ID | 4600088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 129511 |
|---|
| End bp | 130020 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639774725 |
|---|
| Product | regulatory protein, MarR |
|---|
| Protein accession | YP_921347 |
|---|
| Protein GI | 119714382 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0627652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGC CCGAGCGGGC CGGCCCGGCG AGCGAGTTCG CCGATGCCTG GCGTCAGACC
GGGAGCCTGG TCGCCCTGCG CGAGGCGATC GAGGCGGGTG CCCGGGTGCG CCACGTGGTC
GCCCGGCGCG CGGGGCTGAG CGACTCCGAG CTGGTCGCGC TCCAGCACCT GGTCCGGACC
TCGCTAGGCC CCGCGGAGCT GGCCCGGATC CTCGACATCA GCACCGCCGC GTCGACCGGA
GTCGTCGACC GGCTCGCCGA GCGGGGGCAC GTCGAGCGGC ACCCGCACGC CGAGGACCGC
CGTCGCACGG ACGTGCGGGT GACCGCGTCC GGGCGCGAGG AGGTGCTCGC GCACCTGCTG
CCGATGTTCA CCGCCCTGGA CGCCTGGGAC CGCTCGTTCA CCGAAGCCGA GCGCGCGCTG
GTCGAGCGGT ACCTGCGGGG CGTCCGGGCG GCCTTCGAAC AGGTCTTCGA CCCGCCGGTG
ATCGCTCAGC CGCCACCCTC GGAGGCGTAG
|
|---|
| Protein sequence | MAKPERAGPA SEFADAWRQT GSLVALREAI EAGARVRHVV ARRAGLSDSE LVALQHLVRT
SLGPAELARI LDISTAASTG VVDRLAERGH VERHPHAEDR RRTDVRVTAS GREEVLAHLL
PMFTALDAWD RSFTEAERAL VERYLRGVRA AFEQVFDPPV IAQPPPSEA
|
|---|
| |