Gene Noca_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0073 
Symbol 
ID4600124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp82532 
End bp83164 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID639774684 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_921306 
Protein GI119714341 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGAA GGACTCCCGC TCAGTCCTTC GTGAGCGGTC CTCTGTCGCG GGCGATCCTG 
CGGTTGCGCA CCCAGCGCGG CCTCTCCCTG AGCGCCCTGG CTGATCAGTC GGGAGTCGCC 
AAGGGCACCT TGTCGAATCT CGAACGTGGC GTGGGGAACC CGACACTCGA GACCATCTTC 
GCCCTGTCGC GGGGCCTCGG GGTGCCGATC GGTGAGCTCG TCTCGAGTGA GGAGGAGGCG 
GCGTCGACGT TCGTCGGCCG CGACGACGCC CGCCACATCA GGGGCGTCGC CGTCGAGCTG 
ATGCTGTACG ACCGCTTCGC CAGCACGGGA AGCGCGACCG AGATCTACGA CTTCCGTTGC 
CTGCCGGGGG ACCGGCAGGT GTCACGTGGG CATCCGGGCG TGGAGCACAT CGTGGTCAAG 
CAGGGGAGGT TGCTCACGGG CCCGACCTCG TCGCCGATCG AGGTCGGGCC GGGTGACTAC 
GTGTCCTTTC CGTCGTGGGG CGATCACGCC TACGAGGCGC TTGATGAGGT GGTCGAGGGA 
TTCCTCGTCA TCCACTATCC GAACCCGGCG GCACCCTCTG TCGCGATCAA GGTCGAGTCG 
CTGGACTCAC ACGCCGACCG GAGGAAGCCG TGA
 
Protein sequence
MNGRTPAQSF VSGPLSRAIL RLRTQRGLSL SALADQSGVA KGTLSNLERG VGNPTLETIF 
ALSRGLGVPI GELVSSEEEA ASTFVGRDDA RHIRGVAVEL MLYDRFASTG SATEIYDFRC 
LPGDRQVSRG HPGVEHIVVK QGRLLTGPTS SPIEVGPGDY VSFPSWGDHA YEALDEVVEG 
FLVIHYPNPA APSVAIKVES LDSHADRRKP