Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0065 |
Symbol | |
ID | 4600116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 72341 |
End bp | 73780 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639774678 |
Product | integrase catalytic subunit |
Protein accession | YP_921300 |
Protein GI | 119714335 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACGA AGGACTGGAG CAAGAAGACC AGCGATGCGC CGGAGGGGCT TCGTCGGCAG TGGCGTGCTG ATCGGGCGCT GAGGCCGGCG ATGCGCTCGC CCGGGCGACC GGACCCGTCG CGGGTGGTGC AGCGACAGTT CTGGCGGCAG ATCGCCACGG GCGTCACGAC GGTGGAGGCG TCGATGGCCG TGGGCGTGTC GTGGCCGGTC GGTGCTCGCT GGTTTCGCCA CGCTGGCGGC ATGCCGCCGA TCTCGCTGGC CGAGCCCACC GGCCGCCACC TGACCTTCGA GGAACGCGAG GAGATCGCGA TCCTGCGCGC CAAGGACAAG GGCGTGCGCG AGATAGCCCG TGCGATCGGG CGTGACCCGG GGACCGTCTC ACGCGAACTT CGTCGCAATG CAGCGACTCG TGGCGGCAAG CAGGAGTACC GCGCTGGCGT AGCGCAGTGG AAGGCACAGC AGGCGGCGAA GCGTCCCAAG ACCGCGAAGC TCGTGACCAA CGAGCGGTTG CGTGAGTACG TGCAGGATCG GCTCGCCGGC AACGTCCGCC GTCCCGACGG CACGATCGTG CCGGGTCCGA CACCGCCGCC GTGGAAGGGC CTGAACAAGC CGCATCGCCG GGACAGGCGG TGGTCGACGG CTTGGAGCCC GGAGCAGATC GCCCAGCGCC TGAAGGTCGA GTTCCCCGAT GATGAGTCCA TGCGCATCAG CCACGAGGCG ATCTACCAGT CGCTGTTCAT CGAGGGCCGC GGTGCGCTCA AGCGCGAACT GGTCACCTGT CTGCGCACCG GGCGTGCGCT GCGGGAGCCG CGGGCCCGGT CACGGAACAA GGCACAGGGG CACGTGACCG CCGATGTCGT TCTCAGCGAG CGCCCCGCTG AGGCAGACGA CCGGGCCGTC CCTGGCCACT GGGAGGGCGA TCTGATCATC GGCACGGGTC GGTCTGCGAT CGGCACCCTC GTCGAGCGCA GCAGTCGCTC AACGCTCCTG GTCCATCTGC CGCGACTGGA GGGCTGGGGT GAGAAGCCGT ACGTCAAGAA CGGGCCATCA CTCGGTGGCT ACGGGGCCGT CGCGATGAAC ACCGCGCTGA CCGCGTCGAT GACCAAGCTG CCCGAGCAGC TGCGCAAGAC CCTGACGTGG GACCGTGGCA AGGAACTCTC GGGCCACGCG TTGTTCGCGG TGGCGACCGG CACGAAGGTG TTCTTCGCCG ACCCGCACTC GCCGTGGCAG CGACCGAGCA ACGAGAACAC CAACGGCCTG TTGCGCCAAT ACTTCCCCAA GGGCACCGAC CTGTCGCGCT GGTCCGCCGA GGACCTGGAG GCCGTCGCCT ATGCGCTCAA CAACCGGCCC CGCAAGGTCC TCGGGTGGAA GACACCCGCT GAGGTCTTCG AGGAGCAACT ACGCTCCCTT CAACAACCCG GTGTTGCATC GACCAGTTGA
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Protein sequence | MATKDWSKKT SDAPEGLRRQ WRADRALRPA MRSPGRPDPS RVVQRQFWRQ IATGVTTVEA SMAVGVSWPV GARWFRHAGG MPPISLAEPT GRHLTFEERE EIAILRAKDK GVREIARAIG RDPGTVSREL RRNAATRGGK QEYRAGVAQW KAQQAAKRPK TAKLVTNERL REYVQDRLAG NVRRPDGTIV PGPTPPPWKG LNKPHRRDRR WSTAWSPEQI AQRLKVEFPD DESMRISHEA IYQSLFIEGR GALKRELVTC LRTGRALREP RARSRNKAQG HVTADVVLSE RPAEADDRAV PGHWEGDLII GTGRSAIGTL VERSSRSTLL VHLPRLEGWG EKPYVKNGPS LGGYGAVAMN TALTASMTKL PEQLRKTLTW DRGKELSGHA LFAVATGTKV FFADPHSPWQ RPSNENTNGL LRQYFPKGTD LSRWSAEDLE AVAYALNNRP RKVLGWKTPA EVFEEQLRSL QQPGVASTS
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