Gene Noca_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0015 
Symbol 
ID4598368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp17570 
End bp18589 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID639774629 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_921252 
Protein GI119714287 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.942264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGGC TACTGCGGCG GCTCGTGATC GCGCCGGCCG TCGTGGCGCT GACCGGGCTG 
CTGTGGTTCA CGCTGCCGCT GTGGGTGATC GGCGCCGCCG CGCTCTCGCC GGTGGTGCCG
GGCCGGCTGC GGCCGCTGCG GATCATGTGG GTGGCGATCG TCTACCTCAC GTGCGAGGCG
ATCCTCCTGG TGGTGCTGTT CGGGCTGTGG CTCGCGTCCG GGTTCGGGTG GCGGCTGCGC
TCGCCGTACT TCGAGGGCAT CCACTACGAC CTGGTCCAGG GCACGATGTG GGTGTTCTTC
CGGGAAGCGC GACGGGTGCT GCGGCTGCGG ATCGAGACCG AGGGCCCGGC ACCGGACGCA
CACCCGGGGC GGCCGGTCCT GGTGTGTTGC CGGCACGCCG GACCGGGGGA CTCCTTCGTG
CTGATCCACA CCCTGATGGC GTGGTACGCC CGGGAGCCGC GCGTGGTGCT CAAGGACACG
CTCGCCTGGG ACCCGGCGAT CGACGTGATC CTCAACCGGA TCCCGGCCCG GTTCATCACG
CCGAACCCCG CGGACGGCGA TCGGCTGGAG GACCAGATCG CCACCCTGGC GACCGGACTG
GACGAGAACG ACGCGTTCGT GATCTTCCCC GAGGGCGGCA ACTTCACCCC GCAGCGCCGG
CAGCGGGCCA TCGACCGGCT CCGCCGGCTC GGCATGGAGC GGATGGCCGC GCGCGCCGAG
CGGATGACCC ATGTCCTGGC GCCGCGGCCC GGTGGCTTCC TCGCCGCGCT CGACGCGGCC
CCGGACGCCG ACGTGGTGCT GGTGGCGCAC ACCGGGCTCG ACCACCTGCT CACCGTCGGC
GACGTCTGGC GCGAGCTGCC GATGGACAAG CGGATCGTGA TGCGGTGGTG GCAGGTGCCG
CGCGGGGAGA TCCCGGCGGA TCGCGACGAG CGGATCGACT GGCTCTACGG CTGGTGGGAG
CGGATCGACG TCTGGATCCA GCAGAACCGG CCCGAGGACC TGTCCCCGGG CCGGCGCTGA
 
Protein sequence
MIRLLRRLVI APAVVALTGL LWFTLPLWVI GAAALSPVVP GRLRPLRIMW VAIVYLTCEA 
ILLVVLFGLW LASGFGWRLR SPYFEGIHYD LVQGTMWVFF REARRVLRLR IETEGPAPDA
HPGRPVLVCC RHAGPGDSFV LIHTLMAWYA REPRVVLKDT LAWDPAIDVI LNRIPARFIT
PNPADGDRLE DQIATLATGL DENDAFVIFP EGGNFTPQRR QRAIDRLRRL GMERMAARAE
RMTHVLAPRP GGFLAALDAA PDADVVLVAH TGLDHLLTVG DVWRELPMDK RIVMRWWQVP
RGEIPADRDE RIDWLYGWWE RIDVWIQQNR PEDLSPGRR