Gene Noca_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0011 
Symbol 
ID4598364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp14712 
End bp15461 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content76% 
IMG OID639774625 
ProductGntR family transcriptional regulator 
Protein accessionYP_921248 
Protein GI119714283 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTACGC TGCCCGGGAT GCCCCTGCAA CCCGTGAACC GCCGCTCGGT TCCCGACGAG 
GTCTTCGACC AGGTCCTCTC CGAGGTGGTC GACGGCGGCA TCGGCGCGGG TGAGGCGCTG
CCCAGCGAGC GCCGCCTCGC GGAGGTGCTC GGCGTCTCCC GGCCCGCGGT CCGCGAGGCG
CTGCAGCGGA TGGCGCAGAC CCGGTTGCTC GACGTGCGCC ACGGCGGCGC GACGACGGTG
CGCGACTTCC GGCGGTACGG CGGCCTCGAC CTGCTCCCCC GTCTCCTGGT GCGCCGCGGC
GAGCTCGACC CGGCCGTGGC GCGCAGCATC CTCGAGGCCC GGCTGGTGGT CGGCCCCGGG
GTGGCCGCCC TGGCGGCCGA GCGCGGCGGG CCCGCCCTCG AGCCGGTGCT CGCCGAGACG
GTCGCTGCGC TCGAAGGCAC CGAGGACGGC ATCGAGCGGC AGCGGCACGC CCTGGCGTTC
TGGGACCTGG TCGTCGACGC CGCCGACTCG ATGGTGTTCC GGCTGATGTT CAACAGCCTG
CGGGCGGCCT ACGAGCCGGC CCTCGAGGCG CTGGCCGCGC TGATGGCCGA GGAGGTCGGC
CAGGTCGGGG CCTACCGGCT GCTGACGGCC GCGATCGGGG CCGGCGATCC CGAGACGGCG
CGGGCGGCGG CCGACCGGGT GCTGCGCCCG GCCACCACCA GCCTGCTCAC CGCCCTCGCC
GCACTGGACT CGGACCAGGA GGACTCATGA
 
Protein sequence
MPTLPGMPLQ PVNRRSVPDE VFDQVLSEVV DGGIGAGEAL PSERRLAEVL GVSRPAVREA 
LQRMAQTRLL DVRHGGATTV RDFRRYGGLD LLPRLLVRRG ELDPAVARSI LEARLVVGPG
VAALAAERGG PALEPVLAET VAALEGTEDG IERQRHALAF WDLVVDAADS MVFRLMFNSL
RAAYEPALEA LAALMAEEVG QVGAYRLLTA AIGAGDPETA RAAADRVLRP ATTSLLTALA
ALDSDQEDS