Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0005 |
Symbol | |
ID | 4598356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 5506 |
End bp | 6072 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639774617 |
Product | hypothetical protein |
Protein accession | YP_921242 |
Protein GI | 119714277 |
COG category | [R] General function prediction only |
COG ID | [COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAGTG ACGAGCCGCT CGGTTCGCAG CCCGCGGACC TGCCGGCGCC GGCAGGGGGG GCGGAGGCAC CCGAGCACCA CGACGACGGC CTCGACCTGG CCAAGGCGCT GACCCGCGCG ACCGCGCGGT CCACCCCGGC CGCGCGCAAG AGGCTGCGCA AGAAGGACAC CCCCCGGCGG GGCCGGGCCT CCGGGGCCCA TCCCGACGAC CGGGACCCGC AGCTGCTCGA CGCGACGCTC AGCCGCCTGG TCGACGACCA CGGCTGGGAG CTGGACCTGC GGGTGCACGG GGTCTTCGGC CGCTGGGCCG AGCTGGTCGG CGCCGAGGTC GCCCGGCACA CGACCCCGGA GTCCTTCACC GACGGTCGAC TGGTCGTGCG CACCGACTCG ACGGCCTGGG CGACCCAGCT GCGACTGCTG GCCCCGACCG TGGTCCGCCG TCTCAACGAG GAGCTCGGCC ACGGGACCGT GACCGTCATC GAGGTGCTCG GCCCGCACGG TCCGACGTGG AAGAAGGGCC CGCGTTCGGT CCGCGACGGT CGCGGGCCAC GAGACACCTA CGGCTGA
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Protein sequence | MSSDEPLGSQ PADLPAPAGG AEAPEHHDDG LDLAKALTRA TARSTPAARK RLRKKDTPRR GRASGAHPDD RDPQLLDATL SRLVDDHGWE LDLRVHGVFG RWAELVGAEV ARHTTPESFT DGRLVVRTDS TAWATQLRLL APTVVRRLNE ELGHGTVTVI EVLGPHGPTW KKGPRSVRDG RGPRDTYG
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