Gene Noca_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0005 
Symbol 
ID4598356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp5506 
End bp6072 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content75% 
IMG OID639774617 
Producthypothetical protein 
Protein accessionYP_921242 
Protein GI119714277 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGTG ACGAGCCGCT CGGTTCGCAG CCCGCGGACC TGCCGGCGCC GGCAGGGGGG 
GCGGAGGCAC CCGAGCACCA CGACGACGGC CTCGACCTGG CCAAGGCGCT GACCCGCGCG
ACCGCGCGGT CCACCCCGGC CGCGCGCAAG AGGCTGCGCA AGAAGGACAC CCCCCGGCGG
GGCCGGGCCT CCGGGGCCCA TCCCGACGAC CGGGACCCGC AGCTGCTCGA CGCGACGCTC
AGCCGCCTGG TCGACGACCA CGGCTGGGAG CTGGACCTGC GGGTGCACGG GGTCTTCGGC
CGCTGGGCCG AGCTGGTCGG CGCCGAGGTC GCCCGGCACA CGACCCCGGA GTCCTTCACC
GACGGTCGAC TGGTCGTGCG CACCGACTCG ACGGCCTGGG CGACCCAGCT GCGACTGCTG
GCCCCGACCG TGGTCCGCCG TCTCAACGAG GAGCTCGGCC ACGGGACCGT GACCGTCATC
GAGGTGCTCG GCCCGCACGG TCCGACGTGG AAGAAGGGCC CGCGTTCGGT CCGCGACGGT
CGCGGGCCAC GAGACACCTA CGGCTGA
 
Protein sequence
MSSDEPLGSQ PADLPAPAGG AEAPEHHDDG LDLAKALTRA TARSTPAARK RLRKKDTPRR 
GRASGAHPDD RDPQLLDATL SRLVDDHGWE LDLRVHGVFG RWAELVGAEV ARHTTPESFT
DGRLVVRTDS TAWATQLRLL APTVVRRLNE ELGHGTVTVI EVLGPHGPTW KKGPRSVRDG
RGPRDTYG