| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0002 |
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| Symbol | |
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| ID | 4598432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2029 |
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| End bp | 3255 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639774614 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_921239 |
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| Protein GI | 119714274 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGCC CAGAACGTGC ACTTCTCCCA CCCCCGTTCA ACCCCCGCTC AACCCTCGCT
CCACCGAGCC GACCCGAAGG AACCATCGTG AAGTTCCGCG TCGAGCGCGA CGTGCTCGCC
GATGCCGTCG CCTGGGCTGC CCGCAGCCTC CCGGTCCGTC CCAGCGTCCC CGTCCTCGCC
GGCCTGCTCG TCGAGGCGAG CGACGACGGC CTGGTGCTCT CCACCTTCGA CTACGAGACC
TCCGCCCGGG CCACCCTGAC GGCCGAGGTG AGCGACGAGG GGCAGGCCCT GGTCAGTGGC
CGACTGCTCG CCGACATCTG CCGGAGCCTG CCCGCGAAGC CCGTCGAGAT GGTCCTCGAC
GGGGCCCGGG TGTCGCTGAC CTGTGGCTCG GCGCGGTTCA GCCTGCAGAC GATGCCGGTT
GACGACTACC CGTCCCTGCC GAGCATGCCC GCGGCGACCG GCACCGTGCA GAGCGAGGCC
TTTGCACACG CCGTCGCCCA GGCCGTGACG GCGGCGGGTC GCGACGACAT GCTGCCCGTG
CTCACCGGCG TGCGGATCGA GATCGACGGC TCGACCATCT CGCTGCTCGC CACCGACCGG
TTCCGCCTCT CCCACCGGGA GCTGGAGTGG AGTCCGCGGA CCCCGGACGA GTCGGCGGCC
GCCCTGGTCC CGGCACGGGT CCTCGGCGAC ACCGCCAAGT CCCTGACCGG GGGCGGCGAG
GTCACGATCG CGCTGGCGAC CACCGGCTCC GGCGAGGGCA TCATCGGCTT CGAGGGCCAT
GGTCCCGGCG GACTGCGTCG GACCACGACC CGGCTGCTCG ACGGCGAGTT CCCGAAGGTC
CGCAGCCTGT TCCCGAACGA GCACCAGACC ACGGCGCTGG TCGACAAGGC CGCGCTCGTC
GAGTCGGTGA AGCGGGTGGC GCTGGTCGCC GAGCGCAACA CCGCGGTCCA GCTCGCCTTC
AGCGACGGCG TACTGACCCT CGACGCCGGG TCGGGCGACG AGGCCCAGGC CTCGGAGTCG
ATCGAGGCGA CCATCGACGG TGAGGACATC ACCACGGGCT TCAACCCGCA GTTCCTGCTC
GACGGCCTGA CCGCCATCGA CCAGCCGGTG GTCGAGCTCG CCTTCACCCA GGCCTCCAAG
CCGGTGGTGA TCAGCGGCGC GGTCGACGGC GACGACACCG ACTCGTCATT CCGCTACCTG
CTGATGCCGC GCCGCCTGCT CTCCTAG
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| Protein sequence | MQSPERALLP PPFNPRSTLA PPSRPEGTIV KFRVERDVLA DAVAWAARSL PVRPSVPVLA
GLLVEASDDG LVLSTFDYET SARATLTAEV SDEGQALVSG RLLADICRSL PAKPVEMVLD
GARVSLTCGS ARFSLQTMPV DDYPSLPSMP AATGTVQSEA FAHAVAQAVT AAGRDDMLPV
LTGVRIEIDG STISLLATDR FRLSHRELEW SPRTPDESAA ALVPARVLGD TAKSLTGGGE
VTIALATTGS GEGIIGFEGH GPGGLRRTTT RLLDGEFPKV RSLFPNEHQT TALVDKAALV
ESVKRVALVA ERNTAVQLAF SDGVLTLDAG SGDEAQASES IEATIDGEDI TTGFNPQFLL
DGLTAIDQPV VELAFTQASK PVVISGAVDG DDTDSSFRYL LMPRRLLS
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