| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1825 |
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| Symbol | |
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| ID | 4602062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1767899 |
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| End bp | 1768822 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639774598 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_921223 |
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| Protein GI | 119720728 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0185284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGGCC TTAAAGAAGT CCTTCGGAGA AGGCTCCCGC TCCTGCTGAT AGTAGCCGTA
GTCATTCTCG GAGCCGTCCT GGTGTTGCTC CGCCAGGGAG CAACGCAGAC CAGGCTGACA
CCCTATATCG CGCAGATAAC GATAAAGGGA ACCATAGACT ACGCCTCCAG CTCTATATTC
GGCGCCACGC CGGGCGTAGA GGAGTACATA AAGCTCGTAA AGCAGGCCGA GGAGGACCCG
ATGGCCAAAG CCGTACTACT CGTCTTCGAC AGCCCCGGGG GAACAGTTAC AGCCTCGGAC
GAGCTCTACC AGGCGGTCAA AGAGCTTTCC CAGAAGAAGG TTGTAGTCTC CTACGCAAAG
GGGCTACTCG CGAGCGGGGC GTACATGGCT GCCCTCCCGT CCCGCGCGAT ACTCGCGAGC
CCTACCAGCG AAGTGGGCTC CGTCGGCGTG ATAGTGACTG TCCTTAACGT CGGGAACCTC
CTCGGAAAGA TAGGAGTCAC CGTGTATACC TTCAAGTCGG GAGAGCTGAA GGACGTAGGA
TCCCCCTACA GGCCGATGAC CGAGGAGGAC GCCAAGGTCT TGGAGGAGAT GGTGAACTAC
TACTTCGGGC TGTTCAAGGG CAGGGTTCTC GAACACAGGG GCAACGTGAG CAGCGAGGTT
TTCAGCGGGA GACCTTTCAC GCCCGACAAG GCGTTGCAGG CTGGCCTGAT AGACAAGGTG
TGCACCTACC AGGAGGCTGT TAACTACACG CGGGCGCTAG CCAACCTACC GGAGACCGCT
GAGGTAGTCG AGCTCAAGCC GAGGACCCCA ACGCTCCTCG ACCTGCTACT CGGAACTTAC
TCCGGCGCCG GCAACAGGCT CGTCATACCG AGCATCGTGG TACTCTACAT GTGGCCGCCG
CCTGTCGCCG TGATCCTTCC TTGA
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| Protein sequence | MSGLKEVLRR RLPLLLIVAV VILGAVLVLL RQGATQTRLT PYIAQITIKG TIDYASSSIF
GATPGVEEYI KLVKQAEEDP MAKAVLLVFD SPGGTVTASD ELYQAVKELS QKKVVVSYAK
GLLASGAYMA ALPSRAILAS PTSEVGSVGV IVTVLNVGNL LGKIGVTVYT FKSGELKDVG
SPYRPMTEED AKVLEEMVNY YFGLFKGRVL EHRGNVSSEV FSGRPFTPDK ALQAGLIDKV
CTYQEAVNYT RALANLPETA EVVELKPRTP TLLDLLLGTY SGAGNRLVIP SIVVLYMWPP
PVAVILP
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