Gene Tpen_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1816 
Symbol 
ID4602053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1758922 
End bp1759317 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content59% 
IMG OID639774589 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_921214 
Protein GI119720719 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.149378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTAGGC TGGTAATAGT AGACGTGGAT AAGTGCGTGG GATGCATGTC CTGCATGTTC 
GCATGCTCGA GGAGGTTTGG CGAGGGTGGG CTCGCGAAGT CCGCGATACA CGTTTCGAGC
ATAGGGGGCG TGGAGAGAGG GTTTAAGGTC GTCGTGTGCA GGGCTTGTGA GAACCCTCCC
TGCGCGGCTG TATGCCCTAC GAACGCCCTG GTTAGGAGGG AGGGAGGGGG AGTCGTGTTA
AACCCGAGTA AGTGCGTGGG ATGCGGTAAC TGCGCGAGGG CTTGCCCCAT AGGGGCCGTG
CAGTGGGACT ACGAGAGCAT GAAGCCCATA ATATGCGTTC ACTGTGGCTA CTGCGTCAAC
TACTGCCCGT ACGGCGTTTT ATCCCTTTCG AGGTGA
 
Protein sequence
MPRLVIVDVD KCVGCMSCMF ACSRRFGEGG LAKSAIHVSS IGGVERGFKV VVCRACENPP 
CAAVCPTNAL VRREGGGVVL NPSKCVGCGN CARACPIGAV QWDYESMKPI ICVHCGYCVN
YCPYGVLSLS R