Gene Tpen_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1804 
Symbol 
ID4601797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1743432 
End bp1743839 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content53% 
IMG OID639774577 
Producthypothetical protein 
Protein accessionYP_921202 
Protein GI119720707 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0031996 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAG GTCTAGCAAT AATAATGTTC TCAGGGACAG CGGACAAGTT CATACCCCTA 
GGCGTCCTCA CGCAGACAGC CGCTAACCTA GGCGTCCCCG TAAGGATCTT CGTGACAGGC
TTCGCTACTC CCTACTTCAC CAAGAACAAG CCTCAACCCA GGTTCCCCAA GGAATTTGAA
GACATGGTAC CCGGGCTCCT CAAAGGGCTC GAAAAAATGA AGGCTCCGAG CTGGTACGAC
ATGGTTCGCG AGGCGAAGGA GGTAGGCGAC GTGAAAGTCT ACGTGTGTAG CCTGATAGCC
GAAGCCCTAG GCCTGAAGAA GGAGGACCTA GACCCGATAG TAGACGACAT AGTCGGAGCG
ACGTTCTTCA TGAAGGAGAC CGCCGAATAC GAGGTAATAT TCATATAG
 
Protein sequence
MSKGLAIIMF SGTADKFIPL GVLTQTAANL GVPVRIFVTG FATPYFTKNK PQPRFPKEFE 
DMVPGLLKGL EKMKAPSWYD MVREAKEVGD VKVYVCSLIA EALGLKKEDL DPIVDDIVGA
TFFMKETAEY EVIFI