Gene Tpen_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1797 
Symbol 
ID4601920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1737838 
End bp1738359 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content60% 
IMG OID639774570 
Producttransporter 
Protein accessionYP_921195 
Protein GI119720700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGCGA AGAGTCTGTC GGTAGCCGCA GTCCTGGGGG CGCTCTACGC CGCGCTTGTC 
ATAGTGCTAC AGCCCATATC GTTCCTAGCT TTCCAAGTGA GGCTGGCAGA CGCACTGCTC
CCGCTCTCCA TGGTTCTCGG AGTCCCAGCC GCGGTTGGCG TGAGCGTTGG ATGCTTCTTC
GGAAACCTCG TAGCCGCTCC CTGGGGGAGC CTCGCTCTGG GGCTCTTCGA CGCGGTGTTC
GGTTCGCTCG CTAACTTCGC GGCGTCGTAC CTGGCGTACA TCGTGGCGTA CAACAAGGGG
AGGCGCGCGA AACTAGCGGG GGCTGTTCTA GAGGCAGTCG TTGTAAGTGG GATCGTGGGG
TTCTACCTCA AGTACCTACT GCTGTGGGCA ATGGGCGTCG ATATGCCCTT GGAAGCCGTC
TTCCTGGGAG TCTTGGCGGG CTCGGTGGTG TCTATAATCG CCATAGGATA CCCCCTGGCA
ATCCTCGTAG AAAAGCCCTT GAAGAACCTC GTAAAGGAAT GA
 
Protein sequence
MNAKSLSVAA VLGALYAALV IVLQPISFLA FQVRLADALL PLSMVLGVPA AVGVSVGCFF 
GNLVAAPWGS LALGLFDAVF GSLANFAASY LAYIVAYNKG RRAKLAGAVL EAVVVSGIVG
FYLKYLLLWA MGVDMPLEAV FLGVLAGSVV SIIAIGYPLA ILVEKPLKNL VKE