Gene Tpen_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1786 
Symbol 
ID4601930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp1727926 
End bp1728591 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID639774559 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_921184 
Protein GI119720689 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.70169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCGT TCGAGGAAGC CGTGAGGGCA GGGGCAGACT TCGTGGAGAC AGACGTGCAC 
AGGACGCGGG ACGGCGCGCT CGTCTGCATT CACGACGCAA CGCTGAACCG GACCACGAAC 
GGGGACGGGT ACGTCTCGGA GAAGACTGTG GACTACGTTA GGAGCCTGGA CGCCGGCTCC 
TGGTTTTCCG GGAGGTACGC GGGAGTACAG GTACCGCTCT TCGAGGAGTT CCTCGATTAC 
ATCGCCTCGA CGAGCGCGGG GGTGTTCGTC GAGGTTAAGG TCCCGGGTAT AGAGGAGGAG 
GTCGTCGGGA GGATCCTGCA GTGGGGGCTA GAGGAGAGAG CGGTTGTGCT CTCGGGGTAT 
TGGAGCGTGC TGAGGAGGGT GAAGGAGCTC GACCCGGGGA TAGCTACTCT CGCCGACCTG 
CCCAGCCCGT CTCCCCAGTC CATATCCTCG GCGGTGAAAG TGGCAAATAT CGTCAGCATC 
CACGCCGCGC TCTTCGAGGA AGAGCACGCC CTGCAGGCTC ACAGAAGGGG GCTACTGGTA 
AATGTCTGGG GCGTAAACGG CTGCGAGGAT GCGTTAAGGG TGGTCGAGCT GGGCGCCGAC 
TTCGTAACCG TGGACAACCC GGGCGCTATT GTTGAGTGCT TGAGGGCGCG GGGTCTCCAC 
GCCTAA
 
Protein sequence
MPAFEEAVRA GADFVETDVH RTRDGALVCI HDATLNRTTN GDGYVSEKTV DYVRSLDAGS 
WFSGRYAGVQ VPLFEEFLDY IASTSAGVFV EVKVPGIEEE VVGRILQWGL EERAVVLSGY 
WSVLRRVKEL DPGIATLADL PSPSPQSISS AVKVANIVSI HAALFEEEHA LQAHRRGLLV 
NVWGVNGCED ALRVVELGAD FVTVDNPGAI VECLRARGLH A