| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1761 |
|---|
| Symbol | |
|---|
| ID | 4601959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1701319 |
|---|
| End bp | 1702725 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639774534 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_921159 |
|---|
| Protein GI | 119720664 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3372] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.987591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCCGT CCAACCTCCT CGTGGCACGC GCGCGGCGGG GGCGCATCGA GCCCCTGCTA
CTCGAGCCTT CCGGGCTACC GGTGGCCCTC GCCTCGGAGG TCCTGGAGCT CTTCGAGCGG
GGGGTGGGCA AGGGCAGGAG GGAGCTTGAG GAGGGCCTCG CCGACCTGGA GGAACTCGCC
CTCGAGCTGG GCCTCGACCT CAGGGTAGTC AGGGCTATGT TCACGCTCGC GGCGCGGCAC
GCGAGGTTCG AGCCCCCGAA GGCCCCCGTC GACCCCGTGA AGGCGAGGAT GGAGGTCTTC
GAGGAGGCTT GCAGGGAGTT CGGAGTAGCG GTCACGGAGG AGGAGAGGTC TACGGTGCTC
CGGCGGGTAG CGGAGAGGCT CGGCTGCAGC GTCGAGGACC TGGAGTCGGT GCTCGGCGGG
TACCTCGAGG AAGTACTGGC GGAGCCCCCG GCGCTGAAGG CCGAGGACCT CGTGAGGATG
CTTAACCTCT CGATGGTGCA GACGCTGCTC TTCAAGGCCT CGCAGCTCGA AGTGGTCTTC
AGGAGCGACG GCGCGACGGC GAAGAAGCTG CTGAGAGCGG TGAAGAGGCT GGGCCTACTC
TACGTCGCGG AGCAGCTCGG CGAGGGGGTG AGGCTAACCG TGGACGGGCC CGCGTCGCTG
CTGAGGCAGA CCAGGAGGTA CGGGACCAGG CTGGCGAAGC TAGTCCCACT CGTGATGCTG
GCTGAGCGCT GGAGGATCAG GGCTAGGGTC CCGGCGAGGG GGAGGGACCT CTTCTTCGAG
CTCGGCGACG AGAAGTCGGG GCTGTTCCCA AGGGTGGAGG AGGAGCCGGA GCCCCTCTTC
GACAGCGAGG TCGAGAGGGA GTTCTACAGG AGCATCTCGA GCCTCGCGCG CGGCTGGAGG
GTGGAGCGGG AGCCCGAGCC GCTCGTAGCC GGGAACAAGG TCCTGATACC CGACTTCTCG
GTGTCGAACG GCGAGAGGAA GGTGTACATA GAGATACTCG GCTTCTGGAC CAAGGACTAC
CTGGAGAGGA AGATGCAGAA GCTTAGAGAG CTACGCGGGG TCAACATCGT GGTAGCCGTG
AACGAGGAGC TAGCGTGCTC CTCCGTGAAG GACCTGCCCC ACGACGTCGT GGTCTTCAAG
GGGCGGCTGA GGGGGGCGGA CGTCTACCCG GTACTCAAGC GCTACCTCGG CGAGCCCCCC
GAGGAGCCGC GAGAAGAAGT CGAGTACCGC CTGGAGGGGC TACCGGACCT CTCCGGGAGA
ACACTCTCCG AGGCTATCAG GGAGCTCAGG AAGCTGGGGG TCCCCGAGAG CGAGGCAGTC
AAGGTGCTCG AAAAGCTGGG CTACGGGGTC GACTGGACAA CGCTAGACCC CGACAAGCTC
GTACTGAAAA AGAATAAACG CCGGTAG
|
|---|
| Protein sequence | MLPSNLLVAR ARRGRIEPLL LEPSGLPVAL ASEVLELFER GVGKGRRELE EGLADLEELA
LELGLDLRVV RAMFTLAARH ARFEPPKAPV DPVKARMEVF EEACREFGVA VTEEERSTVL
RRVAERLGCS VEDLESVLGG YLEEVLAEPP ALKAEDLVRM LNLSMVQTLL FKASQLEVVF
RSDGATAKKL LRAVKRLGLL YVAEQLGEGV RLTVDGPASL LRQTRRYGTR LAKLVPLVML
AERWRIRARV PARGRDLFFE LGDEKSGLFP RVEEEPEPLF DSEVEREFYR SISSLARGWR
VEREPEPLVA GNKVLIPDFS VSNGERKVYI EILGFWTKDY LERKMQKLRE LRGVNIVVAV
NEELACSSVK DLPHDVVVFK GRLRGADVYP VLKRYLGEPP EEPREEVEYR LEGLPDLSGR
TLSEAIRELR KLGVPESEAV KVLEKLGYGV DWTTLDPDKL VLKKNKRR
|
|---|
| |