Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1739 |
Symbol | |
ID | 4601764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1682249 |
End bp | 1682863 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639774512 |
Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
Protein accession | YP_921137 |
Protein GI | 119720642 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.749284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATAC CAGACGGGTA CCTCGACCCG GCGATGTGCG CAGTCACCTA CGCGCTCTCC CTGGCGGTCC TGGCGTTCTC CGCGTTGAAG GCTAGGAGCG CGGGCTCCGA GCAGAAGACC CTTGTCCCCG TCCTCGCCGC CGCTATCTTC GCGGCCCAGA TGCTGAACTG GCCTATACCC GGCGGGACCT CGCTGCACCT GGTCGGCGGG GCTCTCGCCT CGATACTGGT TGGCCCCTGG CTCGCTAGCC TCACTATGTT CCTCGTGCTC TTGACGCAGG CTCTAGTCTT CCACGACGGC GGTATAACGA CTCTCGGCGC CAACGTCTTA AACATGGGGA TAGTGGCGGT GTTCGCCGGG TACCTCGCGT ACAGGGCTTT CCCGGAGCGC CTCCGCGTGG TCGGAGCCTT CCTGGCTGGG TGGCTCAGCA TAACCCTGGC GGGCGTTGTG TGCGGCGTGG AGCTGGGGCT CTCGAAGCAG TTCCTCTACG GGCTCTCGGT CACGGTGCCG GTGATGGGGG GCTGGCACGC GCTCCTCGGG GTGGTGGAGG GCTTGATCAC GGCTTCCGTC TACGCCTACC TGAAGTCTAA GGCTCCCCAG CTCGTAGCGG GGTGA
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Protein sequence | MHIPDGYLDP AMCAVTYALS LAVLAFSALK ARSAGSEQKT LVPVLAAAIF AAQMLNWPIP GGTSLHLVGG ALASILVGPW LASLTMFLVL LTQALVFHDG GITTLGANVL NMGIVAVFAG YLAYRAFPER LRVVGAFLAG WLSITLAGVV CGVELGLSKQ FLYGLSVTVP VMGGWHALLG VVEGLITASV YAYLKSKAPQ LVAG
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