| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1725 |
|---|
| Symbol | |
|---|
| ID | 4601750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1667611 |
|---|
| End bp | 1668675 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639774498 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_921123 |
|---|
| Protein GI | 119720628 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.24734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTT GCTTTGTTTG CTCGCATTTA TGGCCTCACT CCTACGGCGG GGCAGAGAGG
AGGTACTACA TCCTCGCCAA AGAGCTTATG AAGAGAGGGC ACGACGTCGT ATACGTCACG
TACGACTACG GCGAAAGCGA AATCCCCCTA GCGACCGTGG GACCCCCACC TAGGCTCTAC
GACGAGAAGG GCAGGAGGCG CCTACTCCCA GCGCTGGAGT TCGGCTGGAA GACCGCGAAG
CTCGTTGAAA AGCTGAAGTG CGACGTGGTA GACGTCACGG TGCCGTACAC GACCGCGCTT
TTCATGAAGC CACGTAGCTT CGTGCTGACG TACCACGAGT ACTGGGGAAA ATATTGGGAG
CACTACTTCT CCAAGCCTCT GGGAACACTC GCCGCCATCG CGGAGAAAAG GCTACTGAGG
AAAGCCGTGC TCGTAATCAC ACCTTCCAAG CTCGTGGCCA ACAGGATCCT AAGCGAGGTG
GGCACCGTGA AGGTAGCACC GGTACCCATA GGTCTGAACC CCGACGACTA CGCGAAGTAC
AGGGGGCGAA GCAGGGACAT AGACGTCACC ATGATCGGCA GGTTCACGTA CACAAAGGGC
TGGTGGAGGC TAATAGAAGT ACTCAGGCAG GTAGACAAGC CCCTCCGAGT AGCAGTAGTA
GGAGACGGCC CACTCTACAA CGAAGTAACC GCGCAGCTCG AAAAGCTACA CCACGAGGTG
CACAGCTACA GGAAGGCAAG CGAAGAGGAA AAACTCGAAC TACTCGCGCG CAGCAAGTAC
TACCTAAACC TCTCAGACGC CGAAGGATTC AGCATAGCAA CCCTCGAAGC AATCCTATGC
GGAGCAACAC CCATAGTCCT CGACACAGGG CTCAATGCTG CAGTCGAAAT AGTAGAAGAG
ACAGGTTGCG GCTACATAGC CAAAAACCTG AGAGAAATTG CGGAACAAGT AGCCAAGGAA
ACCAGTACCT GCACGCCCAA TATATCGGGC TACACCATTC AGACTTTCGT CAACAATTAC
CTCAGATTTT TAGGAGAGCT TCAGACGATG AGAGTAAATG CGTGA
|
|---|
| Protein sequence | MKVCFVCSHL WPHSYGGAER RYYILAKELM KRGHDVVYVT YDYGESEIPL ATVGPPPRLY
DEKGRRRLLP ALEFGWKTAK LVEKLKCDVV DVTVPYTTAL FMKPRSFVLT YHEYWGKYWE
HYFSKPLGTL AAIAEKRLLR KAVLVITPSK LVANRILSEV GTVKVAPVPI GLNPDDYAKY
RGRSRDIDVT MIGRFTYTKG WWRLIEVLRQ VDKPLRVAVV GDGPLYNEVT AQLEKLHHEV
HSYRKASEEE KLELLARSKY YLNLSDAEGF SIATLEAILC GATPIVLDTG LNAAVEIVEE
TGCGYIAKNL REIAEQVAKE TSTCTPNISG YTIQTFVNNY LRFLGELQTM RVNA
|
|---|
| |