Gene Tpen_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1715 
Symbol 
ID4601740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp1654197 
End bp1655285 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content57% 
IMG OID639774488 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_921113 
Protein GI119720618 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAG TTGTATCAAT AGTCGGTGCG CGCCCCAACT TCGTGAAGCT AGCCGCGGTC 
GCAGAGACCT TCGACAGAGA ATTCGAGCAC ACAGTCATCC ATACGGGCCA GCACTACGAC 
TACGAGATGT CGAAGGTATT CTTCGAGCAA CTGAGACTCC GCGACCCAGA CATACACCTC 
GGCGTCGGGT CGGGGAGCCA GGGCTACCAG GTCGGCGAGA TAGTCAAGAA AGCCGAGGAG 
CACTTGAAGA GCATAAACCC CGACGTGGTG GTCGTCTACG GCGACACAAA CAGCACGCTC 
GCCGGCGCCC TCGCCGCCGC GAAAGCCGGT TACCCAGTGG CACACGTAGA AGCAGGGCTA 
CGCTCGCACG ACATGAAAAT GCAGGAGGAG ATAAACAGGA GAGTCGTCGA CCACGTGTCA 
GCACTCCTCT TCGCGCCGAC CCCCTCCGCC AGGGACAACC TGCTGAAAGA AAACGTGCCC 
GGAAAAGTCT TCCTCACAGG CGACGTCCAC GTGGACGTGC TCCAAAAATG GATAGAAAGC 
ATACAGAGAT CCAACATACT CGGAAGGCTG GGGCTACTGG AGGGGGAGTA CGTGATGGCG 
ACAATCCACC GCGCCGAAAA CGTCGACGAC CCAGCAAAGC TAGCAGAAGT AATCAAGTGC 
CTCAAAGAAC TGGCGGCACT CACGAAGGTC GTTTTCCCCA TCCACCCCCG CACAAGGAGC 
AGAGCAGAAG AAGCAGGTTT AGAAAAAGAG CTATACAGCA ACCCCAACCT CGTAGCCACG 
AAGCCCCTCG GCTACGTAGA CTTCCTCAGA CTAGTCACGG GGTCAAAACT CGTCGTCACA 
GACTCGGGAG GGGTGCAACG AGAAGCCTAC CTTCTAGGAA AGCCAGCGAT AGTCCTACGC 
GACCGAACGG AATGGATAGA GCTCGTGCAG GCCGAATGGG TCAGACTCGC CGACGCAAAC 
CCAGCCAGGC TCGTACAGGA GTACAAAAAA CTGCTAGAAA AGCCACCAGC CCCACAACCC 
GGGCTACTCG GCGACGGAAA AGCCGCCGAG CGAATAACGA AAACTATTTC AGAGCTAATG 
AGAAGATGA
 
Protein sequence
MTKVVSIVGA RPNFVKLAAV AETFDREFEH TVIHTGQHYD YEMSKVFFEQ LRLRDPDIHL 
GVGSGSQGYQ VGEIVKKAEE HLKSINPDVV VVYGDTNSTL AGALAAAKAG YPVAHVEAGL 
RSHDMKMQEE INRRVVDHVS ALLFAPTPSA RDNLLKENVP GKVFLTGDVH VDVLQKWIES 
IQRSNILGRL GLLEGEYVMA TIHRAENVDD PAKLAEVIKC LKELAALTKV VFPIHPRTRS 
RAEEAGLEKE LYSNPNLVAT KPLGYVDFLR LVTGSKLVVT DSGGVQREAY LLGKPAIVLR 
DRTEWIELVQ AEWVRLADAN PARLVQEYKK LLEKPPAPQP GLLGDGKAAE RITKTISELM 
RR