| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1708 |
|---|
| Symbol | |
|---|
| ID | 4601670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1647452 |
|---|
| End bp | 1647757 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639774481 |
|---|
| Product | transcriptional regulator/antitoxin, MazE |
|---|
| Protein accession | YP_921106 |
|---|
| Protein GI | 119720611 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.537768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGCTCGG AAAACCTTAT ATTTCTGAGT AACAAGATGG TATCTGAGAA AATTATGATA
TCCGAGGTCA GAGTAAGGCT CAGCAAAAAG AACACCCTAT ACATACCGAA AAGCATAGCC
AAAGCCGTTG GAATCAGGGA GGGCTCCAAG CTGAAACTCA GGGTCGAGGG CCACCGCATA
ATAATCGAGC CCGTGCCTGA CCCCTTCGAG CTCGCACTAC ACGGCTCCAA GTTCGCCGAA
ACCACGTTTG AGGAATTCGA AAAGGAATCG GAGGAGCTCC AAGATGAGCT CTTCGGCCAG
GATTAG
|
|---|
| Protein sequence | MCSENLIFLS NKMVSEKIMI SEVRVRLSKK NTLYIPKSIA KAVGIREGSK LKLRVEGHRI
IIEPVPDPFE LALHGSKFAE TTFEEFEKES EELQDELFGQ D
|
|---|
| |