| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1685 |
|---|
| Symbol | |
|---|
| ID | 4600573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1634106 |
|---|
| End bp | 1635266 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639774458 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_921083 |
|---|
| Protein GI | 119720588 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000183285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGAGTTA GGGCCGAGTT TCTGAGGCTA CTGGAGGAGG ACGTGGAGTT TAGGTATGCA
GTCGCAGGCT ACCTGGGAGT GTTAGAGGTT TTGAGGAGGC TAGACTCCCT AGCCGAGGAG
ATGAAGAGGC TCAGAGAAGA AATGCACGCG GGCTTCGCGA AGCACGGGGA AATACTTGAA
AGGCTCGAAA AGATCCTCGA GAAGCACGAA GAGGCCTTGA GAAGACACGA TGAGGAGCTA
ATCAGGCTTA GAGAGGACAT GAATAAGGGG TTTGCCAGGC ACGACGAGCA ACTCGCAAAG
CTTAGGGAAG ACATGAACTC CGGCTTCGCG AGGCACGACG AAGCATCGAG AAGGCACGAG
GAGCAACTTG TGAAGCTTAG AGAGGACTTC AACAAGCTGA GGGAGGATAT GAACAAGGGC
TTCGCTAGAC ACGACGAGGC TCTTAAAAGG CATGAAGAAG AACTCGTGAA GCTTAGGGAG
GACATGAACG CCGGCTTTGC TAGACAAGAC AAAGAGCTCA CCAGGCTTAG AGAGGACATG
AACGCCGGTT TCGCTAGGCA TGACGAGTTA TTCAGGAGGC ATGAAGAGGA GATGAAGGGA
CTACGGGAGG ATATGAATAA GGGATTTGCC AGGCACGATG AAGCGTTGAG GAGGCACGAG
GAAGAGCTAG TAAAGCTCAG AGAGGACATG AACAAAGGCT TTGCTAGACA CGACGAGGCG
CTGAGGAGGC ATGAGGAGAT TTTAGAGAAG CATAGCGAGG AGTTAGCAAA GTTGAGGAGC
GCTATGATTG CCGGTTTTGG GGAGTTAAGC AAGTTTGCGG GTATGACCTT CGAGGAATTT
GTTAGGAAGT TCCTGACCGC TTACCTCAGG GAGGCGGGCG AAGTCCCGGA AGGCTCAGAG
CTGAGGAGGG AGGTCGTAGA AGGCGAGGAG ATAGACCTCT TCCTCGAAGA ACCACTCATA
GTCGGAGAAG TAACGGCACA CGCAGAGTCC CTGGAGGAGC TTGAGAAGCT AGTCAGGAAG
GCGGAGCTGG TGAAAGCCAA GTACGGTAAA GAACCCAGGA AAATCCTAGT CATACTTACA
GCGCCCAGGG ACTTAGCAGA GAAACTTGAA AAAATTGCCG GCGAGAAGGG CGTAGAGCTC
ATAATAGGGA GAACAGCCTA G
|
|---|
| Protein sequence | MGVRAEFLRL LEEDVEFRYA VAGYLGVLEV LRRLDSLAEE MKRLREEMHA GFAKHGEILE
RLEKILEKHE EALRRHDEEL IRLREDMNKG FARHDEQLAK LREDMNSGFA RHDEASRRHE
EQLVKLREDF NKLREDMNKG FARHDEALKR HEEELVKLRE DMNAGFARQD KELTRLREDM
NAGFARHDEL FRRHEEEMKG LREDMNKGFA RHDEALRRHE EELVKLREDM NKGFARHDEA
LRRHEEILEK HSEELAKLRS AMIAGFGELS KFAGMTFEEF VRKFLTAYLR EAGEVPEGSE
LRREVVEGEE IDLFLEEPLI VGEVTAHAES LEELEKLVRK AELVKAKYGK EPRKILVILT
APRDLAEKLE KIAGEKGVEL IIGRTA
|
|---|
| |