| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1684 |
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| Symbol | |
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| ID | 4600572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1632509 |
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| End bp | 1633861 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639774457 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_921082 |
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| Protein GI | 119720587 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000631579 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGGAG GAGGATCCAA GCTGAGGCTC GTAACCACCT CTCTGCTCGT CACACTCCTG
ATCCTGTCAC TACGGCTAGC GGTCTACGCG CTTACGAACA GCCTCGCCGT GCTCGCGGAC
GCTTTCCACA GCCTGGTAGA CATACTGGGG AACGTGTTCG CCGTAGCGGC TGTCGCCGTC
TCCTCGAAGG GGCCCGACGC GGACCACTCC TACGGGCACG AGAAAGCCGA GAGCCTCGGC
ACGCTGTTCG TCGCTGGGCT ACTGACGGTA ATCTTTGCGT TCATAGTTTA CGAGTCGCTT
CAAAGAGCCC TCGCGCCCAG CTACTCGGTC GCGTTCACCG CGTGGTCCTC CCTTCTCCTC
GCGTTCACGA TGTCGATGGA CATGTGGAGG GCGAGGGCTC TCTCCAGGGG CGCGCGGCTC
TACAGGTCCA CGGTTCTGGA AGCCGACGCG CTACACTACA CCAGCGACTT CTACGCCACC
GGGACTATCC TCGCGCTGAG CGTGGTCGGC ACGCTGTACA AGGGCCCGTA CCTCAAGTAC
CTGGACATGG CCGTGAGCGT AGCGATCGCC GGCTACTTCG CTTACTCGTC GCTGAGGCTC
GCCAAGACAG CCGTAGACGA GCTCATGGAT AGGACTCCCA CAGAGGTCGT AGCCCTCTTC
CGCGAAGTCG CCTCGAGCCG CGGTCTACCC GTCGAGAGGG TTAGAGCCAG GAAGGCGGGG
CCCAGGGTTT TCCTCGACGC CGTGGCGCGG ATCCCGCCGG GCATGACCCT AGAGGAGGCT
CACAGGCTCG TAGACGAGGT GGAGGAGGAG CTGAGGGGCA GGGCGGGGGT GGACGTAGAC
GTTACTATAC ACATGGAGCC CCAGGACGAA GTAGCGGCTA CGATCGCCCG TAGAGTGGAA
GAGGCGGCTC GCCGCGAAGG AGTAGTCAGA GTGCACGGAC TAGAGCTAGC CAGGGGCGAG
GGCGGGGTAC ACGTAAGGTT TCACGTGGAG GCTAAGCCGG ACGTCAGCGT CGAGGAGGCG
AAGAGGATAG CGGACGAGCT TAAAAGAGAG GTAGAGTCGA CGCCCGGCGT TTCCAGCGTC
GTTGTCCACG TAGAGCCGGC GGCGAAGAGC GAGGAAGACG TCAGGAAAGC CGTGGAAAGA
GTGCTGAGCC GGGAGGGGCT CCGCGGGAAG CTCGAAGTCG CCGACGTAAA GGTTGTAAAG
ACCGAGGGGA AGACGCTCGT AGACATAGTG TGCAAGGTTC CCCGGGGGGA AAGCATAGAG
GAAGCCCACA GGAGTGTGGG TAGGCTTGAA GGAGTGCTGA GGGAGGAGCT CGGCGAGAAG
TACCTGGTCA CCGTATGCCT GGAGCCAACT TAG
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| Protein sequence | MPGGGSKLRL VTTSLLVTLL ILSLRLAVYA LTNSLAVLAD AFHSLVDILG NVFAVAAVAV
SSKGPDADHS YGHEKAESLG TLFVAGLLTV IFAFIVYESL QRALAPSYSV AFTAWSSLLL
AFTMSMDMWR ARALSRGARL YRSTVLEADA LHYTSDFYAT GTILALSVVG TLYKGPYLKY
LDMAVSVAIA GYFAYSSLRL AKTAVDELMD RTPTEVVALF REVASSRGLP VERVRARKAG
PRVFLDAVAR IPPGMTLEEA HRLVDEVEEE LRGRAGVDVD VTIHMEPQDE VAATIARRVE
EAARREGVVR VHGLELARGE GGVHVRFHVE AKPDVSVEEA KRIADELKRE VESTPGVSSV
VVHVEPAAKS EEDVRKAVER VLSREGLRGK LEVADVKVVK TEGKTLVDIV CKVPRGESIE
EAHRSVGRLE GVLREELGEK YLVTVCLEPT
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