| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1682 |
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| Symbol | |
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| ID | 4600570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1629399 |
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| End bp | 1631045 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639774455 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_921080 |
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| Protein GI | 119720585 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTAA ACGATTCGAG CGAGGTACCC ACGCTTGCAG CGAGGGATGC CTGCAGGAAT
GTCAGCACGA TTCTTTTCGC CTGGCTCTAC GCCTCGGCGG TAATGCTGAT ACTCTACGAG
TACAGCGGCT GGCAGCCCCT CGGGGAAGCC GCGAAAAGGT TCGGGGTGTA CGCGCTGACA
GGCGGGGACG TAGCCTTCCT GCCGACCCTG CTAGCCTTCC TGGCAGCCCT CCTCGGAGCG
GAGTGCGCCC AGCCGGACGA GAGTAGCGGG GTGTACAGGC TGAAGGTCTT CGCGTACTTG
TCTACCGTCG CGTACGGGCT TGAAAACCTA GCCGCGAGGG AGGCGGCGTA CCTCCTTCCC
ATCCTCGCGT TGCCAGCGAT GTACCCGGTC TTCAAGGTAA CCGCGGGGAG CGGTGGTGAA
GCCTGGTTCC TGGGCGTAAC GCTCTTCTTC GCGGGGCTCC TAGCCCTCGC GGTCAAGCCG
CCCGTGCTCG CATACGTGGG GTTCGCCTAC GCCTTCGTAG CCGTGGCTAG CCAGAGGTGG
CGCGAGCTAC TCCGTAGCGA CGCCTCGCTG CTCGGCAAAG GGTCGGCCCT ACTGCTCCTA
GCGGTACCCG CCTTCGCCGC GTCAGCCTCT GCCTACGAGG CTGCCCTCGG CTGGAACACC
TACCTCGACG TACCGTTACT CGTGCTCGTC GCCTCGCTCA CGGTCTTCGC GGCTCTCCGC
GTGCTTCTCG AGGGGAGTAG CGCGGGCGTA GTGGCGCCGG TGGTATCCTC GGCCGCGGCC
TACGCTGCCC TCGAAGTGTT CAGGGGCACC GCCGTATCTG TGGTGGCGTT GCCCGTCACA
GTCCTCCTCG CGGCCACGTA CGTGTACAGG CTTCTACCCC GCCGGGACGA CTACGCGGCT
ACGGGTATAG CCTTGATGAC GGCTTACATG TCGCTGGTAG AGCCCCTGAG CTACGTGTTC
GGGAAAAGCC CCTGCTACGC ATGCACGGCG GTAGCCGCGC CAGCAATAGC CGCGGGCCCG
CTAACCACCG TGGGCGTTTT AAGGGTGCTC CTACTCCCAC CCGGGAAGGC GGAGCCAGAG
CGGAAGCAGC CCCTCCTCGA AGCCTGGAGT CCTGCCGCGG TCGCCGTGCA GCGCGGGGCG
AAGAGAGGGG CTGTTACCCC GGTGCGCGGT GCCGGCTACG CTAGGCCTAG GCGTAGGCGC
CCCGTGGATT TCGACGGCTT AGCCGCCAGC TACTACCGGG AGGCGCAGAA GTACATGGAG
CTAGCCTACG AGATGAGAAG GAGGGGGCTT CTCGACCAGT CGATGTTCTA CGCCGAGCAG
TCCGTGGAGT TCCTGGTAGA CGCCTTGGCC CTCAAGGTGA AGAGGATAGT GCCGTCCGAG
ATAGAGGACT TCAGGAAGCA CAGGCTCTTC TCGATGATGC TCTTCCTCGT GGAGGGCGAC
GCCGTGCCGA GAAAGGTGGA GGAGTGCCTG CACTTCCTGT CTAAGAGCTA CACGAGGAGG
TACAAGCTGG AGAGCGCCGT GACCTGGGAT GAGGCGGACA GGGCAGTAGA GTGTATGGAG
CGCGCCTGGG AATACGCCAT GAGGAAGTTC GCGGAGCCTC TGCGCGAGCT ACGGGAGAAG
AGCGCCGGGG AAGGGAAAAC CGGGTGA
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| Protein sequence | MGLNDSSEVP TLAARDACRN VSTILFAWLY ASAVMLILYE YSGWQPLGEA AKRFGVYALT
GGDVAFLPTL LAFLAALLGA ECAQPDESSG VYRLKVFAYL STVAYGLENL AAREAAYLLP
ILALPAMYPV FKVTAGSGGE AWFLGVTLFF AGLLALAVKP PVLAYVGFAY AFVAVASQRW
RELLRSDASL LGKGSALLLL AVPAFAASAS AYEAALGWNT YLDVPLLVLV ASLTVFAALR
VLLEGSSAGV VAPVVSSAAA YAALEVFRGT AVSVVALPVT VLLAATYVYR LLPRRDDYAA
TGIALMTAYM SLVEPLSYVF GKSPCYACTA VAAPAIAAGP LTTVGVLRVL LLPPGKAEPE
RKQPLLEAWS PAAVAVQRGA KRGAVTPVRG AGYARPRRRR PVDFDGLAAS YYREAQKYME
LAYEMRRRGL LDQSMFYAEQ SVEFLVDALA LKVKRIVPSE IEDFRKHRLF SMMLFLVEGD
AVPRKVEECL HFLSKSYTRR YKLESAVTWD EADRAVECME RAWEYAMRKF AEPLRELREK
SAGEGKTG
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